Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav4-2A0A075B638 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Trav4-2A0A075B638 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav4-2A0A075B638 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav4-2A0A075B638 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav4-2A0A075B638 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Trav4-2A0A075B638 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trav4-2A0A075B638 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav4-2A0A075B638 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav4-2A0A075B638 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.48■□□□□ 0.23
Trav4-2A0A075B638 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav4-2A0A075B638 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav4-2A0A075B638 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav4-2A0A075B638 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav4-2A0A075B638 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav4-2A0A075B638 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Trav4-2A0A075B638 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC16.48■□□□□ 0.23
Trav4-2A0A075B638 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav4-2A0A075B638 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav4-2A0A075B638 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav4-2A0A075B638 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav4-2A0A075B638 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Trav4-2A0A075B638 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav4-2A0A075B638 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav4-2A0A075B638 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav4-2A0A075B638 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav4-2A0A075B638 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav4-2A0A075B638 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Trav4-2A0A075B638 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.47■□□□□ 0.23
Trav4-2A0A075B638 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav4-2A0A075B638 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav4-2A0A075B638 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav4-2A0A075B638 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Trav4-2A0A075B638 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC16.46■□□□□ 0.23
Trav4-2A0A075B638 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav4-2A0A075B638 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav4-2A0A075B638 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Trav4-2A0A075B638 Golph3-202ENSMUST00000226517 2359 ntBASIC16.45■□□□□ 0.22
Trav4-2A0A075B638 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav4-2A0A075B638 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav4-2A0A075B638 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav4-2A0A075B638 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav4-2A0A075B638 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav4-2A0A075B638 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav4-2A0A075B638 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav4-2A0A075B638 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav4-2A0A075B638 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav4-2A0A075B638 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav4-2A0A075B638 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trav4-2A0A075B638 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav4-2A0A075B638 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav4-2A0A075B638 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav4-2A0A075B638 Pkd1-207ENSMUST00000228550 1050 ntBASIC16.44■□□□□ 0.22
Trav4-2A0A075B638 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav4-2A0A075B638 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav4-2A0A075B638 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav4-2A0A075B638 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav4-2A0A075B638 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav4-2A0A075B638 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav4-2A0A075B638 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav4-2A0A075B638 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.43■□□□□ 0.22
Trav4-2A0A075B638 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav4-2A0A075B638 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav4-2A0A075B638 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trav4-2A0A075B638 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav4-2A0A075B638 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trav4-2A0A075B638 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav4-2A0A075B638 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC16.42■□□□□ 0.22
Trav4-2A0A075B638 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trav4-2A0A075B638 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trav4-2A0A075B638 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav4-2A0A075B638 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav4-2A0A075B638 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav4-2A0A075B638 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.42■□□□□ 0.22
Trav4-2A0A075B638 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav4-2A0A075B638 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trav4-2A0A075B638 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav4-2A0A075B638 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav4-2A0A075B638 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav4-2A0A075B638 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav4-2A0A075B638 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav4-2A0A075B638 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav4-2A0A075B638 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.41■□□□□ 0.22
Trav4-2A0A075B638 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav4-2A0A075B638 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav4-2A0A075B638 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav4-2A0A075B638 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trav4-2A0A075B638 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav4-2A0A075B638 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav4-2A0A075B638 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav4-2A0A075B638 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav4-2A0A075B638 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav4-2A0A075B638 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav4-2A0A075B638 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC16.4■□□□□ 0.22
Trav4-2A0A075B638 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.4■□□□□ 0.22
Trav4-2A0A075B638 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav4-2A0A075B638 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav4-2A0A075B638 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Trav4-2A0A075B638 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav4-2A0A075B638 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms