Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.63■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.62■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.62■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.6■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.6■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.59■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.58■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.57■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.57■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.57■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.55■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav15d-1-dv6d-1A0A075B624 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms