Protein–RNA interactions for Protein: A0A075B622

Trav10n, T cell receptor alpha variable 10N (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10nA0A075B622 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav10nA0A075B622 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav10nA0A075B622 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav10nA0A075B622 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.44■□□□□ 0.54
Trav10nA0A075B622 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trav10nA0A075B622 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav10nA0A075B622 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav10nA0A075B622 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav10nA0A075B622 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.44■□□□□ 0.54
Trav10nA0A075B622 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.44■□□□□ 0.54
Trav10nA0A075B622 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav10nA0A075B622 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav10nA0A075B622 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trav10nA0A075B622 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav10nA0A075B622 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.43■□□□□ 0.54
Trav10nA0A075B622 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Trav10nA0A075B622 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav10nA0A075B622 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav10nA0A075B622 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Trav10nA0A075B622 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Trav10nA0A075B622 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trav10nA0A075B622 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.42■□□□□ 0.54
Trav10nA0A075B622 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.42■□□□□ 0.54
Trav10nA0A075B622 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trav10nA0A075B622 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.42■□□□□ 0.54
Trav10nA0A075B622 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav10nA0A075B622 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.42■□□□□ 0.54
Trav10nA0A075B622 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav10nA0A075B622 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav10nA0A075B622 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav10nA0A075B622 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav10nA0A075B622 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Trav10nA0A075B622 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trav10nA0A075B622 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trav10nA0A075B622 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav10nA0A075B622 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav10nA0A075B622 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav10nA0A075B622 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav10nA0A075B622 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trav10nA0A075B622 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav10nA0A075B622 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav10nA0A075B622 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Trav10nA0A075B622 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Trav10nA0A075B622 Gm10232-201ENSMUST00000089221 720 ntBASIC18.4■□□□□ 0.54
Trav10nA0A075B622 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trav10nA0A075B622 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav10nA0A075B622 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav10nA0A075B622 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trav10nA0A075B622 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav10nA0A075B622 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav10nA0A075B622 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Trav10nA0A075B622 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Trav10nA0A075B622 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav10nA0A075B622 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav10nA0A075B622 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trav10nA0A075B622 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav10nA0A075B622 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Trav10nA0A075B622 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav10nA0A075B622 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav10nA0A075B622 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav10nA0A075B622 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Trav10nA0A075B622 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav10nA0A075B622 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav10nA0A075B622 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav10nA0A075B622 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.37■□□□□ 0.53
Trav10nA0A075B622 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trav10nA0A075B622 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav10nA0A075B622 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav10nA0A075B622 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav10nA0A075B622 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav10nA0A075B622 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Trav10nA0A075B622 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.36■□□□□ 0.53
Trav10nA0A075B622 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.36■□□□□ 0.53
Trav10nA0A075B622 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav10nA0A075B622 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav10nA0A075B622 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav10nA0A075B622 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav10nA0A075B622 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Trav10nA0A075B622 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav10nA0A075B622 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav10nA0A075B622 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav10nA0A075B622 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.35■□□□□ 0.53
Trav10nA0A075B622 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav10nA0A075B622 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav10nA0A075B622 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.34■□□□□ 0.53
Trav10nA0A075B622 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trav10nA0A075B622 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.34■□□□□ 0.53
Trav10nA0A075B622 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav10nA0A075B622 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Trav10nA0A075B622 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav10nA0A075B622 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.33■□□□□ 0.53
Trav10nA0A075B622 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav10nA0A075B622 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav10nA0A075B622 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav10nA0A075B622 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.33■□□□□ 0.53
Trav10nA0A075B622 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trav10nA0A075B622 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Trav10nA0A075B622 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav10nA0A075B622 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.33■□□□□ 0.52
Trav10nA0A075B622 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms