Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav16d-dv11A0A075B617 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav16d-dv11A0A075B617 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav16d-dv11A0A075B617 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav16d-dv11A0A075B617 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trav16d-dv11A0A075B617 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav16d-dv11A0A075B617 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav16d-dv11A0A075B617 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Trav16d-dv11A0A075B617 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav16d-dv11A0A075B617 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav16d-dv11A0A075B617 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav16d-dv11A0A075B617 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trav16d-dv11A0A075B617 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Trav16d-dv11A0A075B617 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav16d-dv11A0A075B617 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav16d-dv11A0A075B617 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav16d-dv11A0A075B617 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav16d-dv11A0A075B617 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav16d-dv11A0A075B617 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trav16d-dv11A0A075B617 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav16d-dv11A0A075B617 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav16d-dv11A0A075B617 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav16d-dv11A0A075B617 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav16d-dv11A0A075B617 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav16d-dv11A0A075B617 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav16d-dv11A0A075B617 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav16d-dv11A0A075B617 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav16d-dv11A0A075B617 Gm12818-201ENSMUST00000117562 1349 ntBASIC15.18■□□□□ 0.02
Trav16d-dv11A0A075B617 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav16d-dv11A0A075B617 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav16d-dv11A0A075B617 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trav16d-dv11A0A075B617 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav16d-dv11A0A075B617 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Trav16d-dv11A0A075B617 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav16d-dv11A0A075B617 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav16d-dv11A0A075B617 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC15.18■□□□□ 0.02
Trav16d-dv11A0A075B617 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav16d-dv11A0A075B617 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav16d-dv11A0A075B617 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Trav16d-dv11A0A075B617 Snhg20-203ENSMUST00000182811 2153 ntBASIC15.18■□□□□ 0.02
Trav16d-dv11A0A075B617 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav16d-dv11A0A075B617 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav16d-dv11A0A075B617 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav16d-dv11A0A075B617 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav16d-dv11A0A075B617 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav16d-dv11A0A075B617 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav16d-dv11A0A075B617 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav16d-dv11A0A075B617 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav16d-dv11A0A075B617 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav16d-dv11A0A075B617 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav16d-dv11A0A075B617 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trav16d-dv11A0A075B617 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav16d-dv11A0A075B617 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav16d-dv11A0A075B617 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav16d-dv11A0A075B617 AC164883.3-201ENSMUST00000227396 1774 ntBASIC15.16■□□□□ 0.02
Trav16d-dv11A0A075B617 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav16d-dv11A0A075B617 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav16d-dv11A0A075B617 Gm44949-201ENSMUST00000206423 1450 ntBASIC15.16■□□□□ 0.02
Trav16d-dv11A0A075B617 Mir3960-201ENSMUST00000198213 73 ntBASIC15.16■□□□□ 0.02
Trav16d-dv11A0A075B617 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trav16d-dv11A0A075B617 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav16d-dv11A0A075B617 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav16d-dv11A0A075B617 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav16d-dv11A0A075B617 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav16d-dv11A0A075B617 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav16d-dv11A0A075B617 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav16d-dv11A0A075B617 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav16d-dv11A0A075B617 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav16d-dv11A0A075B617 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav16d-dv11A0A075B617 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.15■□□□□ 0.02
Trav16d-dv11A0A075B617 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav16d-dv11A0A075B617 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav16d-dv11A0A075B617 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav16d-dv11A0A075B617 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav16d-dv11A0A075B617 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trav16d-dv11A0A075B617 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav16d-dv11A0A075B617 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC15.14■□□□□ 0.01
Trav16d-dv11A0A075B617 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav16d-dv11A0A075B617 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav16d-dv11A0A075B617 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav16d-dv11A0A075B617 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav16d-dv11A0A075B617 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav16d-dv11A0A075B617 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Trav16d-dv11A0A075B617 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav16d-dv11A0A075B617 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav16d-dv11A0A075B617 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav16d-dv11A0A075B617 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav16d-dv11A0A075B617 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC15.13■□□□□ 0.01
Trav16d-dv11A0A075B617 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trav16d-dv11A0A075B617 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav16d-dv11A0A075B617 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav16d-dv11A0A075B617 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav16d-dv11A0A075B617 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trav16d-dv11A0A075B617 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav16d-dv11A0A075B617 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav16d-dv11A0A075B617 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Trav16d-dv11A0A075B617 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Trav16d-dv11A0A075B617 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav16d-dv11A0A075B617 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav16d-dv11A0A075B617 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms