Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav4n-4A0A075B615 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC14.42□□□□□ -0.1
Trav4n-4A0A075B615 Gm5131-201ENSMUST00000212776 1238 ntBASIC14.42□□□□□ -0.1
Trav4n-4A0A075B615 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav4n-4A0A075B615 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav4n-4A0A075B615 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav4n-4A0A075B615 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav4n-4A0A075B615 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trav4n-4A0A075B615 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav4n-4A0A075B615 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trav4n-4A0A075B615 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC14.41□□□□□ -0.1
Trav4n-4A0A075B615 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav4n-4A0A075B615 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav4n-4A0A075B615 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav4n-4A0A075B615 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Trav4n-4A0A075B615 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav4n-4A0A075B615 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav4n-4A0A075B615 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav4n-4A0A075B615 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trav4n-4A0A075B615 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav4n-4A0A075B615 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav4n-4A0A075B615 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav4n-4A0A075B615 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav4n-4A0A075B615 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav4n-4A0A075B615 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav4n-4A0A075B615 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav4n-4A0A075B615 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav4n-4A0A075B615 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC14.4□□□□□ -0.1
Trav4n-4A0A075B615 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav4n-4A0A075B615 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav4n-4A0A075B615 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav4n-4A0A075B615 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav4n-4A0A075B615 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav4n-4A0A075B615 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav4n-4A0A075B615 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Trav4n-4A0A075B615 AC164883.3-201ENSMUST00000227396 1774 ntBASIC14.39□□□□□ -0.11
Trav4n-4A0A075B615 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav4n-4A0A075B615 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav4n-4A0A075B615 AC152827.1-201ENSMUST00000221143 2189 ntBASIC14.39□□□□□ -0.11
Trav4n-4A0A075B615 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav4n-4A0A075B615 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav4n-4A0A075B615 AC117245.4-201ENSMUST00000217388 1646 ntBASIC14.39□□□□□ -0.11
Trav4n-4A0A075B615 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav4n-4A0A075B615 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav4n-4A0A075B615 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav4n-4A0A075B615 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav4n-4A0A075B615 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav4n-4A0A075B615 Gm43545-201ENSMUST00000196765 2779 ntBASIC14.39□□□□□ -0.11
Trav4n-4A0A075B615 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav4n-4A0A075B615 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav4n-4A0A075B615 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav4n-4A0A075B615 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC14.38□□□□□ -0.11
Trav4n-4A0A075B615 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav4n-4A0A075B615 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav4n-4A0A075B615 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav4n-4A0A075B615 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav4n-4A0A075B615 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav4n-4A0A075B615 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav4n-4A0A075B615 Gm8109-201ENSMUST00000194076 746 ntBASIC14.38□□□□□ -0.11
Trav4n-4A0A075B615 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav4n-4A0A075B615 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav4n-4A0A075B615 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav4n-4A0A075B615 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav4n-4A0A075B615 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav4n-4A0A075B615 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trav4n-4A0A075B615 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav4n-4A0A075B615 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav4n-4A0A075B615 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav4n-4A0A075B615 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav4n-4A0A075B615 Gm5987-201ENSMUST00000196433 1151 ntBASIC14.37□□□□□ -0.11
Trav4n-4A0A075B615 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav4n-4A0A075B615 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav4n-4A0A075B615 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav4n-4A0A075B615 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav4n-4A0A075B615 Gm5913-201ENSMUST00000119397 1399 ntBASIC14.36□□□□□ -0.11
Trav4n-4A0A075B615 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav4n-4A0A075B615 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav4n-4A0A075B615 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav4n-4A0A075B615 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav4n-4A0A075B615 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav4n-4A0A075B615 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav4n-4A0A075B615 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav4n-4A0A075B615 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav4n-4A0A075B615 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav4n-4A0A075B615 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav4n-4A0A075B615 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav4n-4A0A075B615 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav4n-4A0A075B615 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav4n-4A0A075B615 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4n-4A0A075B615 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav4n-4A0A075B615 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trav4n-4A0A075B615 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4n-4A0A075B615 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4n-4A0A075B615 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4n-4A0A075B615 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4n-4A0A075B615 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trav4n-4A0A075B615 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC14.35□□□□□ -0.11
Trav4n-4A0A075B615 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4n-4A0A075B615 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4n-4A0A075B615 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms