Protein–RNA interactions for Protein: A0A075B5W6

Ighv1-55, Immunoglobulin heavy variable 1-55 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-55A0A075B5W6 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-55A0A075B5W6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-55A0A075B5W6 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Ighv1-55A0A075B5W6 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-55A0A075B5W6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Ighv1-55A0A075B5W6 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.45■□□□□ 0.22
Ighv1-55A0A075B5W6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-55A0A075B5W6 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Ighv1-55A0A075B5W6 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-55A0A075B5W6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-55A0A075B5W6 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-55A0A075B5W6 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-55A0A075B5W6 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-55A0A075B5W6 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-55A0A075B5W6 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-55A0A075B5W6 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.43■□□□□ 0.22
Ighv1-55A0A075B5W6 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-55A0A075B5W6 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ighv1-55A0A075B5W6 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-55A0A075B5W6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-55A0A075B5W6 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-55A0A075B5W6 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-55A0A075B5W6 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-55A0A075B5W6 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Ighv1-55A0A075B5W6 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-55A0A075B5W6 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-55A0A075B5W6 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.42■□□□□ 0.22
Ighv1-55A0A075B5W6 Gm10399-202ENSMUST00000202768 748 ntBASIC16.42■□□□□ 0.22
Ighv1-55A0A075B5W6 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Ighv1-55A0A075B5W6 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.42■□□□□ 0.22
Ighv1-55A0A075B5W6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-55A0A075B5W6 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-55A0A075B5W6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-55A0A075B5W6 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.42■□□□□ 0.22
Ighv1-55A0A075B5W6 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-55A0A075B5W6 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-55A0A075B5W6 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-55A0A075B5W6 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-55A0A075B5W6 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-55A0A075B5W6 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.41■□□□□ 0.22
Ighv1-55A0A075B5W6 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-55A0A075B5W6 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.41■□□□□ 0.22
Ighv1-55A0A075B5W6 Gm5812-201ENSMUST00000061073 957 ntBASIC16.41■□□□□ 0.22
Ighv1-55A0A075B5W6 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-55A0A075B5W6 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-55A0A075B5W6 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Ighv1-55A0A075B5W6 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-55A0A075B5W6 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-55A0A075B5W6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-55A0A075B5W6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-55A0A075B5W6 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.4■□□□□ 0.22
Ighv1-55A0A075B5W6 Gm15820-201ENSMUST00000201566 728 ntBASIC16.4■□□□□ 0.22
Ighv1-55A0A075B5W6 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.4■□□□□ 0.22
Ighv1-55A0A075B5W6 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.4■□□□□ 0.22
Ighv1-55A0A075B5W6 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-55A0A075B5W6 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-55A0A075B5W6 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-55A0A075B5W6 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.4■□□□□ 0.22
Ighv1-55A0A075B5W6 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-55A0A075B5W6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-55A0A075B5W6 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-55A0A075B5W6 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.22
Ighv1-55A0A075B5W6 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ighv1-55A0A075B5W6 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-55A0A075B5W6 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-55A0A075B5W6 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-55A0A075B5W6 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-55A0A075B5W6 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-55A0A075B5W6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-55A0A075B5W6 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-55A0A075B5W6 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-55A0A075B5W6 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.38■□□□□ 0.21
Ighv1-55A0A075B5W6 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-55A0A075B5W6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-55A0A075B5W6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-55A0A075B5W6 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ighv1-55A0A075B5W6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-55A0A075B5W6 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.38■□□□□ 0.21
Ighv1-55A0A075B5W6 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-55A0A075B5W6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-55A0A075B5W6 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-55A0A075B5W6 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Ighv1-55A0A075B5W6 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-55A0A075B5W6 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-55A0A075B5W6 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-55A0A075B5W6 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.37■□□□□ 0.21
Ighv1-55A0A075B5W6 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.37■□□□□ 0.21
Ighv1-55A0A075B5W6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.37■□□□□ 0.21
Ighv1-55A0A075B5W6 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-55A0A075B5W6 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-55A0A075B5W6 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.36■□□□□ 0.21
Ighv1-55A0A075B5W6 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-55A0A075B5W6 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-55A0A075B5W6 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Ighv1-55A0A075B5W6 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.36■□□□□ 0.21
Ighv1-55A0A075B5W6 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Ighv1-55A0A075B5W6 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-55A0A075B5W6 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-55A0A075B5W6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
Ighv1-55A0A075B5W6 Gm15546-201ENSMUST00000122095 826 ntBASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms