Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Trbv4A0A075B5I2 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trbv4A0A075B5I2 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trbv4A0A075B5I2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Trbv4A0A075B5I2 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Trbv4A0A075B5I2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trbv4A0A075B5I2 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trbv4A0A075B5I2 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trbv4A0A075B5I2 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trbv4A0A075B5I2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trbv4A0A075B5I2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trbv4A0A075B5I2 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trbv4A0A075B5I2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trbv4A0A075B5I2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trbv4A0A075B5I2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trbv4A0A075B5I2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.92■□□□□ 0.94
Trbv4A0A075B5I2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trbv4A0A075B5I2 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Trbv4A0A075B5I2 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trbv4A0A075B5I2 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trbv4A0A075B5I2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trbv4A0A075B5I2 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trbv4A0A075B5I2 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trbv4A0A075B5I2 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trbv4A0A075B5I2 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trbv4A0A075B5I2 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trbv4A0A075B5I2 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trbv4A0A075B5I2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trbv4A0A075B5I2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trbv4A0A075B5I2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trbv4A0A075B5I2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trbv4A0A075B5I2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trbv4A0A075B5I2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trbv4A0A075B5I2 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trbv4A0A075B5I2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trbv4A0A075B5I2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Trbv4A0A075B5I2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trbv4A0A075B5I2 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trbv4A0A075B5I2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trbv4A0A075B5I2 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Trbv4A0A075B5I2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trbv4A0A075B5I2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trbv4A0A075B5I2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trbv4A0A075B5I2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trbv4A0A075B5I2 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trbv4A0A075B5I2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trbv4A0A075B5I2 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.88■□□□□ 0.93
Trbv4A0A075B5I2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.88■□□□□ 0.93
Trbv4A0A075B5I2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trbv4A0A075B5I2 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.87■□□□□ 0.93
Trbv4A0A075B5I2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trbv4A0A075B5I2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.87■□□□□ 0.93
Trbv4A0A075B5I2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Trbv4A0A075B5I2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trbv4A0A075B5I2 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.86■□□□□ 0.93
Trbv4A0A075B5I2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trbv4A0A075B5I2 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Trbv4A0A075B5I2 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.86■□□□□ 0.93
Trbv4A0A075B5I2 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trbv4A0A075B5I2 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.86■□□□□ 0.93
Trbv4A0A075B5I2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Trbv4A0A075B5I2 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trbv4A0A075B5I2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trbv4A0A075B5I2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.86■□□□□ 0.93
Trbv4A0A075B5I2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Trbv4A0A075B5I2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trbv4A0A075B5I2 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.85■□□□□ 0.93
Trbv4A0A075B5I2 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.85■□□□□ 0.93
Trbv4A0A075B5I2 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trbv4A0A075B5I2 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trbv4A0A075B5I2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trbv4A0A075B5I2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trbv4A0A075B5I2 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trbv4A0A075B5I2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trbv4A0A075B5I2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trbv4A0A075B5I2 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Trbv4A0A075B5I2 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trbv4A0A075B5I2 Gm10232-201ENSMUST00000089221 720 ntBASIC20.84■□□□□ 0.93
Trbv4A0A075B5I2 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trbv4A0A075B5I2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trbv4A0A075B5I2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trbv4A0A075B5I2 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trbv4A0A075B5I2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trbv4A0A075B5I2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trbv4A0A075B5I2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trbv4A0A075B5I2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trbv4A0A075B5I2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trbv4A0A075B5I2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.83■□□□□ 0.93
Trbv4A0A075B5I2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trbv4A0A075B5I2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trbv4A0A075B5I2 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trbv4A0A075B5I2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Trbv4A0A075B5I2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Trbv4A0A075B5I2 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trbv4A0A075B5I2 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trbv4A0A075B5I2 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trbv4A0A075B5I2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Trbv4A0A075B5I2 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trbv4A0A075B5I2 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trbv4A0A075B5I2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms