Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.23□□□□□ -0.45
H2afb2S4R1M3 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.23□□□□□ -0.45
H2afb2S4R1M3 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H2afb2S4R1M3 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
H2afb2S4R1M3 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
H2afb2S4R1M3 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H2afb2S4R1M3 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H2afb2S4R1M3 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H2afb2S4R1M3 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
H2afb2S4R1M3 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H2afb2S4R1M3 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H2afb2S4R1M3 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H2afb2S4R1M3 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
H2afb2S4R1M3 Map1b-203ENSMUST00000223725 2669 ntBASIC12.23□□□□□ -0.45
H2afb2S4R1M3 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.23□□□□□ -0.45
H2afb2S4R1M3 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.22□□□□□ -0.45
H2afb2S4R1M3 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Gm14832-201ENSMUST00000121289 322 ntBASIC12.22□□□□□ -0.45
H2afb2S4R1M3 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Gm26956-201ENSMUST00000182176 986 ntBASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Gm5186-201ENSMUST00000218781 920 ntBASIC12.22□□□□□ -0.45
H2afb2S4R1M3 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.22□□□□□ -0.45
H2afb2S4R1M3 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb2S4R1M3 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
H2afb2S4R1M3 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
H2afb2S4R1M3 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb2S4R1M3 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
H2afb2S4R1M3 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb2S4R1M3 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.21□□□□□ -0.45
H2afb2S4R1M3 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb2S4R1M3 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb2S4R1M3 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb2S4R1M3 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.21□□□□□ -0.45
H2afb2S4R1M3 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.21□□□□□ -0.45
H2afb2S4R1M3 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb2S4R1M3 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb2S4R1M3 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.21□□□□□ -0.45
H2afb2S4R1M3 Gm25214-201ENSMUST00000104573 129 ntBASIC12.21□□□□□ -0.45
H2afb2S4R1M3 Gm24845-201ENSMUST00000158034 109 ntBASIC12.21□□□□□ -0.45
H2afb2S4R1M3 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb2S4R1M3 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb2S4R1M3 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.21□□□□□ -0.45
H2afb2S4R1M3 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.21□□□□□ -0.45
H2afb2S4R1M3 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.21□□□□□ -0.45
H2afb2S4R1M3 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb2S4R1M3 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
H2afb2S4R1M3 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.21□□□□□ -0.45
H2afb2S4R1M3 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb2S4R1M3 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb2S4R1M3 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms