Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
H2afb3S4R1G7 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.03□□□□□ -0.64
H2afb3S4R1G7 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H2afb3S4R1G7 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.03□□□□□ -0.64
H2afb3S4R1G7 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
H2afb3S4R1G7 Gm4984-201ENSMUST00000115987 360 ntBASIC11.03□□□□□ -0.64
H2afb3S4R1G7 Gm11964-201ENSMUST00000120982 444 ntBASIC11.03□□□□□ -0.64
H2afb3S4R1G7 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.03□□□□□ -0.64
H2afb3S4R1G7 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
H2afb3S4R1G7 Gm8018-201ENSMUST00000173536 789 ntBASIC11.03□□□□□ -0.64
H2afb3S4R1G7 Gm44882-201ENSMUST00000205702 802 ntBASIC11.03□□□□□ -0.64
H2afb3S4R1G7 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
H2afb3S4R1G7 Gm45925-201ENSMUST00000218882 744 ntBASIC11.03□□□□□ -0.64
H2afb3S4R1G7 Gm45930-201ENSMUST00000221330 292 ntBASIC11.03□□□□□ -0.64
H2afb3S4R1G7 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
H2afb3S4R1G7 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.03□□□□□ -0.64
H2afb3S4R1G7 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
H2afb3S4R1G7 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.03□□□□□ -0.64
H2afb3S4R1G7 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
H2afb3S4R1G7 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H2afb3S4R1G7 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
H2afb3S4R1G7 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H2afb3S4R1G7 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.03□□□□□ -0.64
H2afb3S4R1G7 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
H2afb3S4R1G7 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
H2afb3S4R1G7 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H2afb3S4R1G7 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H2afb3S4R1G7 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H2afb3S4R1G7 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H2afb3S4R1G7 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.03□□□□□ -0.64
H2afb3S4R1G7 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
H2afb3S4R1G7 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H2afb3S4R1G7 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
H2afb3S4R1G7 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
H2afb3S4R1G7 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
H2afb3S4R1G7 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
H2afb3S4R1G7 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
H2afb3S4R1G7 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
H2afb3S4R1G7 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
H2afb3S4R1G7 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
H2afb3S4R1G7 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
H2afb3S4R1G7 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
H2afb3S4R1G7 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
H2afb3S4R1G7 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
H2afb3S4R1G7 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
H2afb3S4R1G7 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H2afb3S4R1G7 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
H2afb3S4R1G7 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
H2afb3S4R1G7 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.02□□□□□ -0.65
H2afb3S4R1G7 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
H2afb3S4R1G7 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.02□□□□□ -0.65
H2afb3S4R1G7 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.02□□□□□ -0.65
H2afb3S4R1G7 Gm16177-201ENSMUST00000120728 718 ntBASIC11.02□□□□□ -0.65
H2afb3S4R1G7 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.02□□□□□ -0.65
H2afb3S4R1G7 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
H2afb3S4R1G7 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
H2afb3S4R1G7 Gm27682-201ENSMUST00000183930 110 ntBASIC11.02□□□□□ -0.65
H2afb3S4R1G7 Gm27243-201ENSMUST00000183964 521 ntBASIC11.02□□□□□ -0.65
H2afb3S4R1G7 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
H2afb3S4R1G7 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.02□□□□□ -0.65
H2afb3S4R1G7 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
H2afb3S4R1G7 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.02□□□□□ -0.65
H2afb3S4R1G7 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
H2afb3S4R1G7 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H2afb3S4R1G7 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H2afb3S4R1G7 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H2afb3S4R1G7 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
H2afb3S4R1G7 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
H2afb3S4R1G7 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.02□□□□□ -0.65
H2afb3S4R1G7 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
H2afb3S4R1G7 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
H2afb3S4R1G7 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
H2afb3S4R1G7 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
H2afb3S4R1G7 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H2afb3S4R1G7 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.02□□□□□ -0.65
H2afb3S4R1G7 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
H2afb3S4R1G7 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.02□□□□□ -0.65
H2afb3S4R1G7 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
H2afb3S4R1G7 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H2afb3S4R1G7 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H2afb3S4R1G7 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H2afb3S4R1G7 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H2afb3S4R1G7 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H2afb3S4R1G7 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms