Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcb1Q9Z0H3 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcb1Q9Z0H3 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcb1Q9Z0H3 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcb1Q9Z0H3 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcb1Q9Z0H3 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Smarcb1Q9Z0H3 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcb1Q9Z0H3 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcb1Q9Z0H3 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcb1Q9Z0H3 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.69□□□□□ -0.38
Smarcb1Q9Z0H3 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcb1Q9Z0H3 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcb1Q9Z0H3 Gm11331-201ENSMUST00000119764 288 ntBASIC12.69□□□□□ -0.38
Smarcb1Q9Z0H3 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcb1Q9Z0H3 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
Smarcb1Q9Z0H3 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.69□□□□□ -0.38
Smarcb1Q9Z0H3 Gm42997-202ENSMUST00000200321 985 ntBASIC12.69□□□□□ -0.38
Smarcb1Q9Z0H3 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.69□□□□□ -0.38
Smarcb1Q9Z0H3 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Smarcb1Q9Z0H3 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcb1Q9Z0H3 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Smarcb1Q9Z0H3 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcb1Q9Z0H3 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcb1Q9Z0H3 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcb1Q9Z0H3 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Smarcb1Q9Z0H3 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcb1Q9Z0H3 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcb1Q9Z0H3 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcb1Q9Z0H3 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcb1Q9Z0H3 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcb1Q9Z0H3 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcb1Q9Z0H3 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcb1Q9Z0H3 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcb1Q9Z0H3 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.69□□□□□ -0.38
Smarcb1Q9Z0H3 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcb1Q9Z0H3 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Gm24891-201ENSMUST00000104391 136 ntBASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Gm11660-201ENSMUST00000120955 412 ntBASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Gm12164-201ENSMUST00000121695 551 ntBASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Gm2965-201ENSMUST00000198365 343 ntBASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Spcs1-203ENSMUST00000226374 592 ntBASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Gm5705-201ENSMUST00000066241 711 ntBASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Smarcb1Q9Z0H3 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Smarcb1Q9Z0H3 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcb1Q9Z0H3 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcb1Q9Z0H3 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Smarcb1Q9Z0H3 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcb1Q9Z0H3 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcb1Q9Z0H3 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcb1Q9Z0H3 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Smarcb1Q9Z0H3 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcb1Q9Z0H3 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcb1Q9Z0H3 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms