Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gm38157-201ENSMUST00000194178 1698 ntBASIC9.75□□□□□ -0.85
Smco4Q9JIS3 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Smco4Q9JIS3 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco4Q9JIS3 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco4Q9JIS3 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco4Q9JIS3 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco4Q9JIS3 Gm6912-201ENSMUST00000117218 544 ntBASIC9.75□□□□□ -0.85
Smco4Q9JIS3 Gm15427-201ENSMUST00000117288 531 ntBASIC9.75□□□□□ -0.85
Smco4Q9JIS3 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC9.75□□□□□ -0.85
Smco4Q9JIS3 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Smco4Q9JIS3 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Smco4Q9JIS3 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC9.75□□□□□ -0.85
Smco4Q9JIS3 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC9.75□□□□□ -0.85
Smco4Q9JIS3 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Smco4Q9JIS3 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC9.75□□□□□ -0.85
Smco4Q9JIS3 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco4Q9JIS3 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC9.75□□□□□ -0.85
Smco4Q9JIS3 Mir5126-201ENSMUST00000175513 77 ntBASIC9.75□□□□□ -0.85
Smco4Q9JIS3 Gm6283-201ENSMUST00000182369 1000 ntBASIC9.75□□□□□ -0.85
Smco4Q9JIS3 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Smco4Q9JIS3 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC9.75□□□□□ -0.85
Smco4Q9JIS3 Gm5425-201ENSMUST00000214125 459 ntBASIC9.75□□□□□ -0.85
Smco4Q9JIS3 AC134335.2-201ENSMUST00000227660 440 ntBASIC9.75□□□□□ -0.85
Smco4Q9JIS3 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco4Q9JIS3 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco4Q9JIS3 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC9.75□□□□□ -0.85
Smco4Q9JIS3 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco4Q9JIS3 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Smco4Q9JIS3 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco4Q9JIS3 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco4Q9JIS3 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Smco4Q9JIS3 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco4Q9JIS3 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC9.75□□□□□ -0.85
Smco4Q9JIS3 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Smco4Q9JIS3 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco4Q9JIS3 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC9.75□□□□□ -0.85
Smco4Q9JIS3 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco4Q9JIS3 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Smco4Q9JIS3 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Smco4Q9JIS3 CT868720.1-201ENSMUST00000223069 2544 ntBASIC9.75□□□□□ -0.85
Smco4Q9JIS3 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC9.75□□□□□ -0.85
Smco4Q9JIS3 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC9.74□□□□□ -0.85
Smco4Q9JIS3 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Gm4804-201ENSMUST00000182234 999 ntBASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Gm18206-201ENSMUST00000207027 926 ntBASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Gm43375-201ENSMUST00000196705 2480 ntBASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco4Q9JIS3 Gm45161-201ENSMUST00000207316 2263 ntBASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms