Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Gm14350-201ENSMUST00000116642 640 ntBASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Gm11803-201ENSMUST00000119966 444 ntBASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Gm14760-201ENSMUST00000121831 999 ntBASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Gm10156-201ENSMUST00000122364 462 ntBASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Gm7561-201ENSMUST00000211203 886 ntBASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Gm10012-201ENSMUST00000078252 192 ntBASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Gm11618-201ENSMUST00000117946 267 ntBASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Proscos-202ENSMUST00000178990 666 ntBASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Gm43818-201ENSMUST00000200605 466 ntBASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Gm8598-201ENSMUST00000221184 836 ntBASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ClpxQ9JHS4 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.21□□□□□ -0.61
ClpxQ9JHS4 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
ClpxQ9JHS4 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
ClpxQ9JHS4 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
ClpxQ9JHS4 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.21□□□□□ -0.61
ClpxQ9JHS4 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.21□□□□□ -0.61
ClpxQ9JHS4 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
ClpxQ9JHS4 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms