Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ush1cQ9ES64 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ush1cQ9ES64 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ush1cQ9ES64 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ush1cQ9ES64 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ush1cQ9ES64 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ush1cQ9ES64 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ush1cQ9ES64 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ush1cQ9ES64 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Ush1cQ9ES64 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Ush1cQ9ES64 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ush1cQ9ES64 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Ush1cQ9ES64 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ush1cQ9ES64 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ush1cQ9ES64 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ush1cQ9ES64 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ush1cQ9ES64 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
Ush1cQ9ES64 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Ush1cQ9ES64 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.02□□□□□ -0.16
Ush1cQ9ES64 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC14.02□□□□□ -0.16
Ush1cQ9ES64 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ush1cQ9ES64 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ush1cQ9ES64 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.02□□□□□ -0.17
Ush1cQ9ES64 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.02□□□□□ -0.17
Ush1cQ9ES64 Gm13813-201ENSMUST00000120998 787 ntBASIC14.02□□□□□ -0.17
Ush1cQ9ES64 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.02□□□□□ -0.17
Ush1cQ9ES64 Gm12138-201ENSMUST00000122180 951 ntBASIC14.02□□□□□ -0.17
Ush1cQ9ES64 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.02□□□□□ -0.17
Ush1cQ9ES64 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ush1cQ9ES64 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.02□□□□□ -0.17
Ush1cQ9ES64 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ush1cQ9ES64 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ush1cQ9ES64 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.02□□□□□ -0.17
Ush1cQ9ES64 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ush1cQ9ES64 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ush1cQ9ES64 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ush1cQ9ES64 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ush1cQ9ES64 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC14.02□□□□□ -0.17
Ush1cQ9ES64 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ush1cQ9ES64 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC14.02□□□□□ -0.17
Ush1cQ9ES64 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ush1cQ9ES64 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ush1cQ9ES64 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ush1cQ9ES64 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ush1cQ9ES64 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1cQ9ES64 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1cQ9ES64 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1cQ9ES64 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1cQ9ES64 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1cQ9ES64 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1cQ9ES64 Gm17244-201ENSMUST00000192482 3416 ntBASIC14.01□□□□□ -0.17
Ush1cQ9ES64 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1cQ9ES64 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1cQ9ES64 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1cQ9ES64 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1cQ9ES64 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1cQ9ES64 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1cQ9ES64 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1cQ9ES64 Gm12341-201ENSMUST00000119724 503 ntBASIC14.01□□□□□ -0.17
Ush1cQ9ES64 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1cQ9ES64 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1cQ9ES64 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1cQ9ES64 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.01□□□□□ -0.17
Ush1cQ9ES64 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.01□□□□□ -0.17
Ush1cQ9ES64 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.01□□□□□ -0.17
Ush1cQ9ES64 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.01□□□□□ -0.17
Ush1cQ9ES64 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.01□□□□□ -0.17
Ush1cQ9ES64 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1cQ9ES64 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1cQ9ES64 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1cQ9ES64 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1cQ9ES64 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1cQ9ES64 Gm37931-201ENSMUST00000194686 2866 ntBASIC14.01□□□□□ -0.17
Ush1cQ9ES64 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1cQ9ES64 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ush1cQ9ES64 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1cQ9ES64 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1cQ9ES64 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1cQ9ES64 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1cQ9ES64 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1cQ9ES64 Gm43267-201ENSMUST00000199664 1796 ntBASIC14.01□□□□□ -0.17
Ush1cQ9ES64 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1cQ9ES64 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1cQ9ES64 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1cQ9ES64 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ush1cQ9ES64 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ush1cQ9ES64 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ush1cQ9ES64 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ush1cQ9ES64 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ush1cQ9ES64 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC14□□□□□ -0.17
Ush1cQ9ES64 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ush1cQ9ES64 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Ush1cQ9ES64 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Ush1cQ9ES64 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ush1cQ9ES64 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ush1cQ9ES64 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ush1cQ9ES64 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ush1cQ9ES64 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14□□□□□ -0.17
Ush1cQ9ES64 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ush1cQ9ES64 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms