Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne8Q9DC53 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne8Q9DC53 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Cpne8Q9DC53 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne8Q9DC53 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne8Q9DC53 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.73□□□□□ -0.37
Cpne8Q9DC53 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne8Q9DC53 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne8Q9DC53 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne8Q9DC53 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne8Q9DC53 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne8Q9DC53 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Cpne8Q9DC53 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne8Q9DC53 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne8Q9DC53 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne8Q9DC53 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne8Q9DC53 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Cpne8Q9DC53 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne8Q9DC53 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
Cpne8Q9DC53 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne8Q9DC53 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.73□□□□□ -0.37
Cpne8Q9DC53 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.73□□□□□ -0.37
Cpne8Q9DC53 Gm27572-201ENSMUST00000183702 255 ntBASIC12.73□□□□□ -0.37
Cpne8Q9DC53 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.73□□□□□ -0.37
Cpne8Q9DC53 Gm28882-201ENSMUST00000185504 314 ntBASIC12.73□□□□□ -0.37
Cpne8Q9DC53 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Cpne8Q9DC53 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne8Q9DC53 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne8Q9DC53 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne8Q9DC53 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne8Q9DC53 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne8Q9DC53 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne8Q9DC53 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne8Q9DC53 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne8Q9DC53 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne8Q9DC53 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne8Q9DC53 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpne8Q9DC53 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cpne8Q9DC53 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Gm10608-202ENSMUST00000213924 676 ntBASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cpne8Q9DC53 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.72□□□□□ -0.37
Cpne8Q9DC53 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cpne8Q9DC53 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cpne8Q9DC53 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Cpne8Q9DC53 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cpne8Q9DC53 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.71□□□□□ -0.37
Cpne8Q9DC53 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cpne8Q9DC53 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Cpne8Q9DC53 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.71□□□□□ -0.37
Cpne8Q9DC53 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cpne8Q9DC53 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cpne8Q9DC53 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cpne8Q9DC53 Gm13786-201ENSMUST00000122371 333 ntBASIC12.71□□□□□ -0.37
Cpne8Q9DC53 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cpne8Q9DC53 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cpne8Q9DC53 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.71□□□□□ -0.37
Cpne8Q9DC53 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cpne8Q9DC53 Mospd4-201ENSMUST00000180618 576 ntBASIC12.71□□□□□ -0.37
Cpne8Q9DC53 Gm27023-201ENSMUST00000182372 285 ntBASIC12.71□□□□□ -0.37
Cpne8Q9DC53 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.71□□□□□ -0.37
Cpne8Q9DC53 Gm35960-201ENSMUST00000202712 767 ntBASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms