Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Trim42Q9D2H5 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.29□□□□□ -0.44
Trim42Q9D2H5 Gm27989-201ENSMUST00000184721 107 ntBASIC12.29□□□□□ -0.44
Trim42Q9D2H5 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim42Q9D2H5 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.29□□□□□ -0.44
Trim42Q9D2H5 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.29□□□□□ -0.44
Trim42Q9D2H5 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.29□□□□□ -0.44
Trim42Q9D2H5 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim42Q9D2H5 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim42Q9D2H5 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim42Q9D2H5 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim42Q9D2H5 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim42Q9D2H5 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trim42Q9D2H5 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim42Q9D2H5 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim42Q9D2H5 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim42Q9D2H5 Gm10829-201ENSMUST00000202084 2988 ntBASIC12.29□□□□□ -0.44
Trim42Q9D2H5 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim42Q9D2H5 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim42Q9D2H5 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.29□□□□□ -0.44
Trim42Q9D2H5 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Gm15703-201ENSMUST00000120250 880 ntBASIC12.28□□□□□ -0.44
Trim42Q9D2H5 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Gm6152-201ENSMUST00000151704 340 ntBASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Auts2-212ENSMUST00000178555 309 ntBASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Mir7684-201ENSMUST00000183858 60 ntBASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Gm43377-201ENSMUST00000201640 455 ntBASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Gm17872-201ENSMUST00000222550 532 ntBASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim42Q9D2H5 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim42Q9D2H5 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.27□□□□□ -0.44
Trim42Q9D2H5 Gm6124-201ENSMUST00000188240 2580 ntBASIC12.27□□□□□ -0.44
Trim42Q9D2H5 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim42Q9D2H5 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.27□□□□□ -0.44
Trim42Q9D2H5 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trim42Q9D2H5 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim42Q9D2H5 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim42Q9D2H5 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Trim42Q9D2H5 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim42Q9D2H5 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim42Q9D2H5 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim42Q9D2H5 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim42Q9D2H5 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim42Q9D2H5 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim42Q9D2H5 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim42Q9D2H5 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim42Q9D2H5 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim42Q9D2H5 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim42Q9D2H5 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim42Q9D2H5 Gm14704-201ENSMUST00000120300 874 ntBASIC12.27□□□□□ -0.45
Trim42Q9D2H5 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim42Q9D2H5 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim42Q9D2H5 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim42Q9D2H5 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.27□□□□□ -0.45
Trim42Q9D2H5 Gm20949-201ENSMUST00000206478 952 ntBASIC12.27□□□□□ -0.45
Trim42Q9D2H5 Gm18307-201ENSMUST00000206864 949 ntBASIC12.27□□□□□ -0.45
Trim42Q9D2H5 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.27□□□□□ -0.45
Trim42Q9D2H5 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim42Q9D2H5 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim42Q9D2H5 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim42Q9D2H5 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms