Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk1aQ9D132 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.57□□□□□ -0.56
Upk1aQ9D132 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Upk1aQ9D132 Gm7029-201ENSMUST00000173226 450 ntBASIC11.57□□□□□ -0.56
Upk1aQ9D132 Gm8018-201ENSMUST00000173536 789 ntBASIC11.57□□□□□ -0.56
Upk1aQ9D132 Gm4271-201ENSMUST00000174444 973 ntBASIC11.57□□□□□ -0.56
Upk1aQ9D132 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.57□□□□□ -0.56
Upk1aQ9D132 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.57□□□□□ -0.56
Upk1aQ9D132 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.57□□□□□ -0.56
Upk1aQ9D132 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk1aQ9D132 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Upk1aQ9D132 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.57□□□□□ -0.56
Upk1aQ9D132 BC043934-202ENSMUST00000185694 2356 ntBASIC11.57□□□□□ -0.56
Upk1aQ9D132 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.57□□□□□ -0.56
Upk1aQ9D132 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk1aQ9D132 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk1aQ9D132 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Upk1aQ9D132 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.57□□□□□ -0.56
Upk1aQ9D132 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk1aQ9D132 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Upk1aQ9D132 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk1aQ9D132 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.57□□□□□ -0.56
Upk1aQ9D132 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk1aQ9D132 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk1aQ9D132 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.57□□□□□ -0.56
Upk1aQ9D132 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk1aQ9D132 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Upk1aQ9D132 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Upk1aQ9D132 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Upk1aQ9D132 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Upk1aQ9D132 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk1aQ9D132 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.56□□□□□ -0.56
Upk1aQ9D132 Gm12314-201ENSMUST00000118104 538 ntBASIC11.56□□□□□ -0.56
Upk1aQ9D132 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Gm9002-201ENSMUST00000178437 499 ntBASIC11.56□□□□□ -0.56
Upk1aQ9D132 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.56□□□□□ -0.56
Upk1aQ9D132 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk1aQ9D132 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Upk1aQ9D132 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Upk1aQ9D132 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Upk1aQ9D132 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Upk1aQ9D132 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Upk1aQ9D132 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Upk1aQ9D132 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.55□□□□□ -0.56
Upk1aQ9D132 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Upk1aQ9D132 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Upk1aQ9D132 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Upk1aQ9D132 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Upk1aQ9D132 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Upk1aQ9D132 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Upk1aQ9D132 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Upk1aQ9D132 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Upk1aQ9D132 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Upk1aQ9D132 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Upk1aQ9D132 Gm15806-201ENSMUST00000120696 955 ntBASIC11.55□□□□□ -0.56
Upk1aQ9D132 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.55□□□□□ -0.56
Upk1aQ9D132 Gm24644-201ENSMUST00000157114 139 ntBASIC11.55□□□□□ -0.56
Upk1aQ9D132 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.55□□□□□ -0.56
Upk1aQ9D132 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Upk1aQ9D132 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.55□□□□□ -0.56
Upk1aQ9D132 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.55□□□□□ -0.56
Upk1aQ9D132 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.55□□□□□ -0.56
Upk1aQ9D132 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms