Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Otud1Q9CUB6 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Gm12015-201ENSMUST00000117065 843 ntBASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Gm14130-201ENSMUST00000118417 987 ntBASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Gm14126-201ENSMUST00000122345 395 ntBASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Otud1Q9CUB6 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Gm2260-201ENSMUST00000184965 657 ntBASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Gm38018-201ENSMUST00000195651 540 ntBASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Rprl1-202ENSMUST00000198476 238 ntBASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Gm9996-201ENSMUST00000070359 913 ntBASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Otud1Q9CUB6 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Otud1Q9CUB6 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.65□□□□□ -0.54
Otud1Q9CUB6 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Otud1Q9CUB6 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Otud1Q9CUB6 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Otud1Q9CUB6 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.65□□□□□ -0.54
Otud1Q9CUB6 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Otud1Q9CUB6 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Otud1Q9CUB6 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Otud1Q9CUB6 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Otud1Q9CUB6 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Otud1Q9CUB6 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Otud1Q9CUB6 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Otud1Q9CUB6 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.65□□□□□ -0.54
Otud1Q9CUB6 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.65□□□□□ -0.54
Otud1Q9CUB6 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Otud1Q9CUB6 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Otud1Q9CUB6 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.65□□□□□ -0.54
Otud1Q9CUB6 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Otud1Q9CUB6 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Otud1Q9CUB6 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Otud1Q9CUB6 Gm19994-201ENSMUST00000217086 586 ntBASIC11.65□□□□□ -0.54
Otud1Q9CUB6 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.65□□□□□ -0.54
Otud1Q9CUB6 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Otud1Q9CUB6 Vmn1r192-201ENSMUST00000072632 1067 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Otud1Q9CUB6 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Otud1Q9CUB6 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Otud1Q9CUB6 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Otud1Q9CUB6 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Otud1Q9CUB6 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Otud1Q9CUB6 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Otud1Q9CUB6 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Otud1Q9CUB6 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Otud1Q9CUB6 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.65□□□□□ -0.54
Otud1Q9CUB6 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Otud1Q9CUB6 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Otud1Q9CUB6 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Otud1Q9CUB6 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Otud1Q9CUB6 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Otud1Q9CUB6 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Otud1Q9CUB6 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Otud1Q9CUB6 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Otud1Q9CUB6 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Otud1Q9CUB6 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Otud1Q9CUB6 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Otud1Q9CUB6 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Otud1Q9CUB6 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Otud1Q9CUB6 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Otud1Q9CUB6 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Otud1Q9CUB6 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.64□□□□□ -0.55
Otud1Q9CUB6 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Otud1Q9CUB6 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Otud1Q9CUB6 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Otud1Q9CUB6 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms