Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Gm24830-201ENSMUST00000102024 166 ntBASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Gm15198-201ENSMUST00000117283 177 ntBASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Gm14726-201ENSMUST00000120623 896 ntBASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Gm15547-201ENSMUST00000122152 333 ntBASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Gm24845-201ENSMUST00000158034 109 ntBASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Gm4034-201ENSMUST00000187674 480 ntBASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Gm3961-201ENSMUST00000204425 994 ntBASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Gm26232-201ENSMUST00000083360 166 ntBASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.95□□□□□ -0.34
Rpa3Q9CQ71 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Gm43179-201ENSMUST00000198797 275 ntBASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa3Q9CQ71 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 Gm3096-201ENSMUST00000185770 364 ntBASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms