Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Gm37922-201ENSMUST00000195596 455 ntBASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Gm24526-201ENSMUST00000082921 158 ntBASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Krt88Q9CPR6 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Krt88Q9CPR6 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Krt88Q9CPR6 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Krt88Q9CPR6 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.64
Krt88Q9CPR6 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.02□□□□□ -0.64
Krt88Q9CPR6 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Krt88Q9CPR6 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Krt88Q9CPR6 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.64
Krt88Q9CPR6 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Krt88Q9CPR6 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Krt88Q9CPR6 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Krt88Q9CPR6 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Krt88Q9CPR6 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Krt88Q9CPR6 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Krt88Q9CPR6 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Krt88Q9CPR6 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Krt88Q9CPR6 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.02□□□□□ -0.65
Krt88Q9CPR6 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.02□□□□□ -0.65
Krt88Q9CPR6 Gm12859-201ENSMUST00000117834 427 ntBASIC11.02□□□□□ -0.65
Krt88Q9CPR6 Gm11424-201ENSMUST00000121929 829 ntBASIC11.02□□□□□ -0.65
Krt88Q9CPR6 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Krt88Q9CPR6 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.02□□□□□ -0.65
Krt88Q9CPR6 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.02□□□□□ -0.65
Krt88Q9CPR6 Mir6392-201ENSMUST00000184924 108 ntBASIC11.02□□□□□ -0.65
Krt88Q9CPR6 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Krt88Q9CPR6 Gm38671-201ENSMUST00000200573 130 ntBASIC11.02□□□□□ -0.65
Krt88Q9CPR6 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Krt88Q9CPR6 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.02□□□□□ -0.65
Krt88Q9CPR6 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.02□□□□□ -0.65
Krt88Q9CPR6 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Krt88Q9CPR6 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Krt88Q9CPR6 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Krt88Q9CPR6 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Krt88Q9CPR6 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.02□□□□□ -0.65
Krt88Q9CPR6 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Krt88Q9CPR6 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Krt88Q9CPR6 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Krt88Q9CPR6 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Krt88Q9CPR6 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Krt88Q9CPR6 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Krt88Q9CPR6 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.02□□□□□ -0.65
Krt88Q9CPR6 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Krt88Q9CPR6 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Krt88Q9CPR6 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Krt88Q9CPR6 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Krt88Q9CPR6 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Krt88Q9CPR6 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Krt88Q9CPR6 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Krt88Q9CPR6 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Krt88Q9CPR6 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Krt88Q9CPR6 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Krt88Q9CPR6 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Krt88Q9CPR6 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Krt88Q9CPR6 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Krt88Q9CPR6 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Krt88Q9CPR6 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Krt88Q9CPR6 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Krt88Q9CPR6 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Krt88Q9CPR6 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.01□□□□□ -0.65
Krt88Q9CPR6 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms