Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12□□□□□ -0.49
Trim16Q99PP9 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12□□□□□ -0.49
Trim16Q99PP9 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12□□□□□ -0.49
Trim16Q99PP9 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trim16Q99PP9 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim16Q99PP9 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12□□□□□ -0.49
Trim16Q99PP9 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim16Q99PP9 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trim16Q99PP9 Gm24526-201ENSMUST00000082921 158 ntBASIC12□□□□□ -0.49
Trim16Q99PP9 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12□□□□□ -0.49
Trim16Q99PP9 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim16Q99PP9 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trim16Q99PP9 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim16Q99PP9 Gm42840-201ENSMUST00000200303 2251 ntBASIC12□□□□□ -0.49
Trim16Q99PP9 Gm37391-201ENSMUST00000194891 2318 ntBASIC12□□□□□ -0.49
Trim16Q99PP9 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim16Q99PP9 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim16Q99PP9 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12□□□□□ -0.49
Trim16Q99PP9 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12□□□□□ -0.49
Trim16Q99PP9 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trim16Q99PP9 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trim16Q99PP9 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12□□□□□ -0.49
Trim16Q99PP9 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim16Q99PP9 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Trim16Q99PP9 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.99□□□□□ -0.49
Trim16Q99PP9 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Trim16Q99PP9 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim16Q99PP9 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.99□□□□□ -0.49
Trim16Q99PP9 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim16Q99PP9 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim16Q99PP9 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim16Q99PP9 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim16Q99PP9 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim16Q99PP9 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim16Q99PP9 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim16Q99PP9 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim16Q99PP9 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trim16Q99PP9 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim16Q99PP9 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.99□□□□□ -0.49
Trim16Q99PP9 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim16Q99PP9 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trim16Q99PP9 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim16Q99PP9 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Trim16Q99PP9 Gm43630-201ENSMUST00000201550 776 ntBASIC11.99□□□□□ -0.49
Trim16Q99PP9 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim16Q99PP9 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim16Q99PP9 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.99□□□□□ -0.49
Trim16Q99PP9 Gm9823-201ENSMUST00000051212 327 ntBASIC11.99□□□□□ -0.49
Trim16Q99PP9 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trim16Q99PP9 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trim16Q99PP9 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim16Q99PP9 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim16Q99PP9 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim16Q99PP9 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim16Q99PP9 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.99□□□□□ -0.49
Trim16Q99PP9 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim16Q99PP9 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim16Q99PP9 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim16Q99PP9 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim16Q99PP9 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Trim16Q99PP9 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim16Q99PP9 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim16Q99PP9 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim16Q99PP9 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim16Q99PP9 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim16Q99PP9 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim16Q99PP9 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim16Q99PP9 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim16Q99PP9 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.98□□□□□ -0.49
Trim16Q99PP9 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Trim16Q99PP9 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim16Q99PP9 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim16Q99PP9 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim16Q99PP9 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim16Q99PP9 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim16Q99PP9 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim16Q99PP9 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim16Q99PP9 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim16Q99PP9 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim16Q99PP9 Gm13492-201ENSMUST00000119772 665 ntBASIC11.98□□□□□ -0.49
Trim16Q99PP9 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim16Q99PP9 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trim16Q99PP9 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Trim16Q99PP9 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim16Q99PP9 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim16Q99PP9 Gm42693-201ENSMUST00000196779 631 ntBASIC11.98□□□□□ -0.49
Trim16Q99PP9 Gm43118-201ENSMUST00000199149 775 ntBASIC11.98□□□□□ -0.49
Trim16Q99PP9 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.98□□□□□ -0.49
Trim16Q99PP9 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.98□□□□□ -0.49
Trim16Q99PP9 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.98□□□□□ -0.49
Trim16Q99PP9 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.98□□□□□ -0.49
Trim16Q99PP9 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.98□□□□□ -0.49
Trim16Q99PP9 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim16Q99PP9 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim16Q99PP9 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trim16Q99PP9 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trim16Q99PP9 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trim16Q99PP9 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trim16Q99PP9 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trim16Q99PP9 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms