Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Gm43380-201ENSMUST00000200421 220 ntBASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Gm12274-201ENSMUST00000120062 385 ntBASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Paupar-201ENSMUST00000194826 3482 ntBASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh23Q99PF4 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.09□□□□□ -0.47
Cdh23Q99PF4 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh23Q99PF4 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh23Q99PF4 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh23Q99PF4 Gm13039-201ENSMUST00000118638 794 ntBASIC12.09□□□□□ -0.47
Cdh23Q99PF4 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh23Q99PF4 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC12.09□□□□□ -0.47
Cdh23Q99PF4 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Cdh23Q99PF4 Gm6423-201ENSMUST00000204315 934 ntBASIC12.09□□□□□ -0.47
Cdh23Q99PF4 Gm44814-201ENSMUST00000207018 434 ntBASIC12.09□□□□□ -0.47
Cdh23Q99PF4 Gm6108-201ENSMUST00000208365 367 ntBASIC12.09□□□□□ -0.47
Cdh23Q99PF4 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cdh23Q99PF4 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh23Q99PF4 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh23Q99PF4 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh23Q99PF4 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC12.09□□□□□ -0.47
Cdh23Q99PF4 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh23Q99PF4 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh23Q99PF4 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cdh23Q99PF4 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.09□□□□□ -0.47
Cdh23Q99PF4 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh23Q99PF4 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cdh23Q99PF4 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh23Q99PF4 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cdh23Q99PF4 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC12.09□□□□□ -0.47
Cdh23Q99PF4 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC12.09□□□□□ -0.47
Cdh23Q99PF4 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh23Q99PF4 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh23Q99PF4 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC12.09□□□□□ -0.47
Cdh23Q99PF4 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Cdh23Q99PF4 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.09□□□□□ -0.47
Cdh23Q99PF4 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cdh23Q99PF4 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh23Q99PF4 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cdh23Q99PF4 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh23Q99PF4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Cdh23Q99PF4 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.09□□□□□ -0.47
Cdh23Q99PF4 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC12.09□□□□□ -0.47
Cdh23Q99PF4 Gm26976-201ENSMUST00000182929 908 ntBASIC12.09□□□□□ -0.47
Cdh23Q99PF4 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh23Q99PF4 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC12.09□□□□□ -0.47
Cdh23Q99PF4 Gm7939-201ENSMUST00000201233 1050 ntBASIC12.09□□□□□ -0.47
Cdh23Q99PF4 BC080696-201ENSMUST00000202858 1218 ntBASIC12.09□□□□□ -0.47
Cdh23Q99PF4 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC12.09□□□□□ -0.47
Cdh23Q99PF4 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Cdh23Q99PF4 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.08□□□□□ -0.47
Cdh23Q99PF4 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Cdh23Q99PF4 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cdh23Q99PF4 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh23Q99PF4 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh23Q99PF4 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh23Q99PF4 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh23Q99PF4 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh23Q99PF4 Gm25562-201ENSMUST00000104608 133 ntBASIC12.08□□□□□ -0.48
Cdh23Q99PF4 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh23Q99PF4 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh23Q99PF4 Gm27826-201ENSMUST00000175282 255 ntBASIC12.08□□□□□ -0.48
Cdh23Q99PF4 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC12.08□□□□□ -0.48
Cdh23Q99PF4 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC12.08□□□□□ -0.48
Cdh23Q99PF4 Gm43547-201ENSMUST00000197729 328 ntBASIC12.08□□□□□ -0.48
Cdh23Q99PF4 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh23Q99PF4 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh23Q99PF4 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms