Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf111Q99ML9 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf111Q99ML9 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf111Q99ML9 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf111Q99ML9 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Rnf111Q99ML9 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Gm12502-201ENSMUST00000120197 444 ntBASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Gm7809-201ENSMUST00000153199 742 ntBASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Snora78-201ENSMUST00000158630 128 ntBASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Gm16296-201ENSMUST00000159905 325 ntBASIC11.88□□□□□ -0.51
Rnf111Q99ML9 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Gm5370-201ENSMUST00000187187 574 ntBASIC11.88□□□□□ -0.51
Rnf111Q99ML9 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 AY702102-202ENSMUST00000194651 1173 ntBASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Gm38092-201ENSMUST00000195600 653 ntBASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Gm18584-201ENSMUST00000203098 964 ntBASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Gm24526-201ENSMUST00000082921 158 ntBASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Rnf111Q99ML9 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Gm16379-201ENSMUST00000161469 348 ntBASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Gm8762-201ENSMUST00000193486 339 ntBASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Gm37102-201ENSMUST00000195740 1105 ntBASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Snora73a-201ENSMUST00000082453 205 ntBASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms