Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdha3Q91Y16 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdha3Q91Y16 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.82□□□□□ -0.36
Pcdha3Q91Y16 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdha3Q91Y16 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdha3Q91Y16 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.82□□□□□ -0.36
Pcdha3Q91Y16 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdha3Q91Y16 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdha3Q91Y16 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdha3Q91Y16 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdha3Q91Y16 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdha3Q91Y16 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Pcdha3Q91Y16 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Pcdha3Q91Y16 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.82□□□□□ -0.36
Pcdha3Q91Y16 Gm13570-201ENSMUST00000140763 309 ntBASIC12.82□□□□□ -0.36
Pcdha3Q91Y16 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdha3Q91Y16 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.82□□□□□ -0.36
Pcdha3Q91Y16 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdha3Q91Y16 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdha3Q91Y16 Gm37259-201ENSMUST00000193903 849 ntBASIC12.82□□□□□ -0.36
Pcdha3Q91Y16 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pcdha3Q91Y16 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.82□□□□□ -0.36
Pcdha3Q91Y16 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.82□□□□□ -0.36
Pcdha3Q91Y16 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdha3Q91Y16 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdha3Q91Y16 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdha3Q91Y16 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pcdha3Q91Y16 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdha3Q91Y16 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdha3Q91Y16 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pcdha3Q91Y16 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdha3Q91Y16 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdha3Q91Y16 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdha3Q91Y16 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdha3Q91Y16 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdha3Q91Y16 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Pcdha3Q91Y16 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdha3Q91Y16 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.81□□□□□ -0.36
Pcdha3Q91Y16 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdha3Q91Y16 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Pcdha3Q91Y16 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdha3Q91Y16 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdha3Q91Y16 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdha3Q91Y16 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdha3Q91Y16 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdha3Q91Y16 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Pcdha3Q91Y16 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdha3Q91Y16 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdha3Q91Y16 Gm11930-201ENSMUST00000117788 190 ntBASIC12.81□□□□□ -0.36
Pcdha3Q91Y16 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Pcdha3Q91Y16 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Pcdha3Q91Y16 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdha3Q91Y16 Gm3096-201ENSMUST00000185770 364 ntBASIC12.81□□□□□ -0.36
Pcdha3Q91Y16 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.81□□□□□ -0.36
Pcdha3Q91Y16 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdha3Q91Y16 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdha3Q91Y16 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Pcdha3Q91Y16 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdha3Q91Y16 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Pcdha3Q91Y16 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.81□□□□□ -0.36
Pcdha3Q91Y16 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdha3Q91Y16 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdha3Q91Y16 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdha3Q91Y16 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Pcdha3Q91Y16 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.81□□□□□ -0.36
Pcdha3Q91Y16 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdha3Q91Y16 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdha3Q91Y16 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdha3Q91Y16 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Pcdha3Q91Y16 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Pcdha3Q91Y16 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdha3Q91Y16 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdha3Q91Y16 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdha3Q91Y16 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdha3Q91Y16 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdha3Q91Y16 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdha3Q91Y16 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdha3Q91Y16 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdha3Q91Y16 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdha3Q91Y16 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Pcdha3Q91Y16 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdha3Q91Y16 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdha3Q91Y16 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdha3Q91Y16 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Pcdha3Q91Y16 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdha3Q91Y16 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdha3Q91Y16 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.8□□□□□ -0.36
Pcdha3Q91Y16 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.8□□□□□ -0.36
Pcdha3Q91Y16 Gm42599-201ENSMUST00000201308 469 ntBASIC12.8□□□□□ -0.36
Pcdha3Q91Y16 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.8□□□□□ -0.36
Pcdha3Q91Y16 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.8□□□□□ -0.36
Pcdha3Q91Y16 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdha3Q91Y16 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.8□□□□□ -0.36
Pcdha3Q91Y16 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdha3Q91Y16 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdha3Q91Y16 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Pcdha3Q91Y16 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Pcdha3Q91Y16 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Pcdha3Q91Y16 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdha3Q91Y16 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms