Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim60Q8VI40 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trim60Q8VI40 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim60Q8VI40 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim60Q8VI40 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Trim60Q8VI40 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim60Q8VI40 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.65□□□□□ -0.38
Trim60Q8VI40 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim60Q8VI40 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim60Q8VI40 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim60Q8VI40 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trim60Q8VI40 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Trim60Q8VI40 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.65□□□□□ -0.38
Trim60Q8VI40 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim60Q8VI40 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trim60Q8VI40 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.65□□□□□ -0.39
Trim60Q8VI40 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim60Q8VI40 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim60Q8VI40 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim60Q8VI40 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim60Q8VI40 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trim60Q8VI40 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim60Q8VI40 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim60Q8VI40 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim60Q8VI40 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim60Q8VI40 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim60Q8VI40 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim60Q8VI40 Gm23912-201ENSMUST00000104687 87 ntBASIC12.64□□□□□ -0.39
Trim60Q8VI40 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim60Q8VI40 Gm13736-201ENSMUST00000119272 253 ntBASIC12.64□□□□□ -0.39
Trim60Q8VI40 Gm13342-201ENSMUST00000121055 207 ntBASIC12.64□□□□□ -0.39
Trim60Q8VI40 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim60Q8VI40 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim60Q8VI40 Gm16379-201ENSMUST00000161469 348 ntBASIC12.64□□□□□ -0.39
Trim60Q8VI40 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Trim60Q8VI40 Gm8762-201ENSMUST00000193486 339 ntBASIC12.64□□□□□ -0.39
Trim60Q8VI40 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.64□□□□□ -0.39
Trim60Q8VI40 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim60Q8VI40 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.64□□□□□ -0.39
Trim60Q8VI40 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.64□□□□□ -0.39
Trim60Q8VI40 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.64□□□□□ -0.39
Trim60Q8VI40 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.64□□□□□ -0.39
Trim60Q8VI40 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim60Q8VI40 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim60Q8VI40 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.64□□□□□ -0.39
Trim60Q8VI40 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim60Q8VI40 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim60Q8VI40 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.64□□□□□ -0.39
Trim60Q8VI40 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim60Q8VI40 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim60Q8VI40 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim60Q8VI40 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim60Q8VI40 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim60Q8VI40 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim60Q8VI40 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Trim60Q8VI40 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim60Q8VI40 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trim60Q8VI40 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim60Q8VI40 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim60Q8VI40 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim60Q8VI40 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.64□□□□□ -0.39
Trim60Q8VI40 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.63□□□□□ -0.39
Trim60Q8VI40 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim60Q8VI40 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim60Q8VI40 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Gm12036-201ENSMUST00000120008 530 ntBASIC12.63□□□□□ -0.39
Trim60Q8VI40 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.63□□□□□ -0.39
Trim60Q8VI40 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim60Q8VI40 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim60Q8VI40 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.63□□□□□ -0.39
Trim60Q8VI40 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trim60Q8VI40 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms