Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.39□□□□□ -0.43
Rpa1Q8VEE4 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rpa1Q8VEE4 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rpa1Q8VEE4 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rpa1Q8VEE4 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Rpa1Q8VEE4 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpa1Q8VEE4 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rpa1Q8VEE4 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.38□□□□□ -0.43
Rpa1Q8VEE4 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpa1Q8VEE4 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.38□□□□□ -0.43
Rpa1Q8VEE4 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Rpa1Q8VEE4 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpa1Q8VEE4 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpa1Q8VEE4 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.38□□□□□ -0.43
Rpa1Q8VEE4 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rpa1Q8VEE4 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpa1Q8VEE4 Gm8805-201ENSMUST00000117848 313 ntBASIC12.38□□□□□ -0.43
Rpa1Q8VEE4 Gm12384-201ENSMUST00000119228 919 ntBASIC12.38□□□□□ -0.43
Rpa1Q8VEE4 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpa1Q8VEE4 Ap1g1-206ENSMUST00000179104 1096 ntBASIC12.38□□□□□ -0.43
Rpa1Q8VEE4 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rpa1Q8VEE4 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Rpa1Q8VEE4 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.38□□□□□ -0.43
Rpa1Q8VEE4 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpa1Q8VEE4 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpa1Q8VEE4 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.38□□□□□ -0.43
Rpa1Q8VEE4 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpa1Q8VEE4 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rpa1Q8VEE4 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rpa1Q8VEE4 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Rpa1Q8VEE4 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpa1Q8VEE4 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Rpa1Q8VEE4 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rpa1Q8VEE4 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.38□□□□□ -0.43
Rpa1Q8VEE4 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Gm8099-201ENSMUST00000200510 742 ntBASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 AC124408.1-201ENSMUST00000228938 707 ntBASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa1Q8VEE4 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms