Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Gm8602-201ENSMUST00000184045 607 ntBASIC11.74□□□□□ -0.53
Lsm1Q8VC85 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Gm42937-201ENSMUST00000197360 752 ntBASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Gm6266-201ENSMUST00000203844 806 ntBASIC11.74□□□□□ -0.53
Lsm1Q8VC85 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.74□□□□□ -0.53
Lsm1Q8VC85 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm1Q8VC85 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Lsm1Q8VC85 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm1Q8VC85 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm1Q8VC85 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms