Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.85□□□□□ -0.51
Rnf8Q8VC56 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf8Q8VC56 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Gm5187-201ENSMUST00000117317 991 ntBASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Gm12291-201ENSMUST00000121627 311 ntBASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Gm8062-201ENSMUST00000139696 444 ntBASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf8Q8VC56 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Gm23363-201ENSMUST00000175024 79 ntBASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Gm22121-201ENSMUST00000175148 54 ntBASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Gm19891-201ENSMUST00000189771 303 ntBASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Gm42627-201ENSMUST00000197347 224 ntBASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.84□□□□□ -0.51
Rnf8Q8VC56 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf8Q8VC56 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Cog3-203ENSMUST00000227473 4197 ntBASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf8Q8VC56 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Rnf8Q8VC56 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Rnf8Q8VC56 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Rnf8Q8VC56 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Rnf8Q8VC56 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.83□□□□□ -0.52
Rnf8Q8VC56 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms