Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup58Q8R332 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC13.12□□□□□ -0.31
Nup58Q8R332 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC13.12□□□□□ -0.31
Nup58Q8R332 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nup58Q8R332 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup58Q8R332 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup58Q8R332 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nup58Q8R332 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup58Q8R332 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup58Q8R332 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup58Q8R332 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Nup58Q8R332 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup58Q8R332 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.12□□□□□ -0.31
Nup58Q8R332 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nup58Q8R332 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Nup58Q8R332 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nup58Q8R332 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup58Q8R332 Gm11964-201ENSMUST00000120982 444 ntBASIC13.12□□□□□ -0.31
Nup58Q8R332 Gm12363-201ENSMUST00000122250 668 ntBASIC13.12□□□□□ -0.31
Nup58Q8R332 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nup58Q8R332 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.12□□□□□ -0.31
Nup58Q8R332 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.12□□□□□ -0.31
Nup58Q8R332 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nup58Q8R332 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup58Q8R332 Gm27243-201ENSMUST00000183964 521 ntBASIC13.12□□□□□ -0.31
Nup58Q8R332 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup58Q8R332 Gm38002-201ENSMUST00000193255 180 ntBASIC13.12□□□□□ -0.31
Nup58Q8R332 Gm42627-201ENSMUST00000197347 224 ntBASIC13.12□□□□□ -0.31
Nup58Q8R332 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup58Q8R332 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nup58Q8R332 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Nup58Q8R332 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nup58Q8R332 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup58Q8R332 Snora73a-201ENSMUST00000082453 205 ntBASIC13.12□□□□□ -0.31
Nup58Q8R332 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC13.12□□□□□ -0.31
Nup58Q8R332 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nup58Q8R332 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Nup58Q8R332 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup58Q8R332 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup58Q8R332 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nup58Q8R332 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup58Q8R332 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nup58Q8R332 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Nup58Q8R332 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup58Q8R332 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup58Q8R332 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup58Q8R332 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup58Q8R332 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.11□□□□□ -0.31
Nup58Q8R332 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Nup58Q8R332 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
Nup58Q8R332 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup58Q8R332 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup58Q8R332 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup58Q8R332 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup58Q8R332 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup58Q8R332 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup58Q8R332 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup58Q8R332 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup58Q8R332 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup58Q8R332 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup58Q8R332 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup58Q8R332 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup58Q8R332 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup58Q8R332 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.11□□□□□ -0.31
Nup58Q8R332 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.11□□□□□ -0.31
Nup58Q8R332 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.11□□□□□ -0.31
Nup58Q8R332 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.11□□□□□ -0.31
Nup58Q8R332 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.11□□□□□ -0.31
Nup58Q8R332 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.11□□□□□ -0.31
Nup58Q8R332 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.11□□□□□ -0.31
Nup58Q8R332 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup58Q8R332 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup58Q8R332 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup58Q8R332 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup58Q8R332 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup58Q8R332 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Nup58Q8R332 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup58Q8R332 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup58Q8R332 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup58Q8R332 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup58Q8R332 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup58Q8R332 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup58Q8R332 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Nup58Q8R332 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup58Q8R332 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup58Q8R332 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup58Q8R332 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup58Q8R332 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup58Q8R332 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup58Q8R332 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup58Q8R332 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.11□□□□□ -0.31
Nup58Q8R332 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nup58Q8R332 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup58Q8R332 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup58Q8R332 Gm45011-201ENSMUST00000207620 2297 ntBASIC13.1□□□□□ -0.31
Nup58Q8R332 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup58Q8R332 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup58Q8R332 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.1□□□□□ -0.31
Nup58Q8R332 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.1□□□□□ -0.31
Nup58Q8R332 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms