Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3a1Q8K4Z5 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3a1Q8K4Z5 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3a1Q8K4Z5 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3a1Q8K4Z5 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC14.98□□□□□ -0.01
Sf3a1Q8K4Z5 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3a1Q8K4Z5 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3a1Q8K4Z5 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3a1Q8K4Z5 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3a1Q8K4Z5 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3a1Q8K4Z5 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Sf3a1Q8K4Z5 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Sf3a1Q8K4Z5 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3a1Q8K4Z5 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Sf3a1Q8K4Z5 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3a1Q8K4Z5 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Sf3a1Q8K4Z5 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3a1Q8K4Z5 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3a1Q8K4Z5 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Sf3a1Q8K4Z5 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.98□□□□□ -0.01
Sf3a1Q8K4Z5 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Sf3a1Q8K4Z5 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3a1Q8K4Z5 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3a1Q8K4Z5 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Sf3a1Q8K4Z5 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC14.97□□□□□ -0.01
Sf3a1Q8K4Z5 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3a1Q8K4Z5 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3a1Q8K4Z5 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.97□□□□□ -0.01
Sf3a1Q8K4Z5 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3a1Q8K4Z5 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Sf3a1Q8K4Z5 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.97□□□□□ -0.01
Sf3a1Q8K4Z5 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3a1Q8K4Z5 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3a1Q8K4Z5 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3a1Q8K4Z5 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3a1Q8K4Z5 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC14.97□□□□□ -0.01
Sf3a1Q8K4Z5 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.97□□□□□ -0.01
Sf3a1Q8K4Z5 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3a1Q8K4Z5 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3a1Q8K4Z5 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3a1Q8K4Z5 Gm5070-201ENSMUST00000177599 862 ntBASIC14.97□□□□□ -0.01
Sf3a1Q8K4Z5 AA914427-201ENSMUST00000193194 1166 ntBASIC14.97□□□□□ -0.01
Sf3a1Q8K4Z5 Gm38317-201ENSMUST00000195564 343 ntBASIC14.97□□□□□ -0.01
Sf3a1Q8K4Z5 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC14.97□□□□□ -0.01
Sf3a1Q8K4Z5 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.97□□□□□ -0.01
Sf3a1Q8K4Z5 Gm13097-201ENSMUST00000210722 397 ntBASIC14.97□□□□□ -0.01
Sf3a1Q8K4Z5 Gm6082-201ENSMUST00000215204 454 ntBASIC14.97□□□□□ -0.01
Sf3a1Q8K4Z5 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3a1Q8K4Z5 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3a1Q8K4Z5 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3a1Q8K4Z5 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3a1Q8K4Z5 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3a1Q8K4Z5 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.97□□□□□ -0.01
Sf3a1Q8K4Z5 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3a1Q8K4Z5 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3a1Q8K4Z5 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3a1Q8K4Z5 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3a1Q8K4Z5 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3a1Q8K4Z5 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3a1Q8K4Z5 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Sf3a1Q8K4Z5 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3a1Q8K4Z5 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3a1Q8K4Z5 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3a1Q8K4Z5 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3a1Q8K4Z5 Gm6963-201ENSMUST00000147879 379 ntBASIC14.96□□□□□ -0.01
Sf3a1Q8K4Z5 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC14.96□□□□□ -0.01
Sf3a1Q8K4Z5 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3a1Q8K4Z5 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.96□□□□□ -0.01
Sf3a1Q8K4Z5 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC14.96□□□□□ -0.01
Sf3a1Q8K4Z5 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC14.96□□□□□ -0.01
Sf3a1Q8K4Z5 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3a1Q8K4Z5 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3a1Q8K4Z5 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3a1Q8K4Z5 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.96□□□□□ -0.02
Sf3a1Q8K4Z5 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.02
Sf3a1Q8K4Z5 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sf3a1Q8K4Z5 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sf3a1Q8K4Z5 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sf3a1Q8K4Z5 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3a1Q8K4Z5 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.95□□□□□ -0.02
Sf3a1Q8K4Z5 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3a1Q8K4Z5 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3a1Q8K4Z5 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3a1Q8K4Z5 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.95□□□□□ -0.02
Sf3a1Q8K4Z5 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3a1Q8K4Z5 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.95□□□□□ -0.02
Sf3a1Q8K4Z5 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3a1Q8K4Z5 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3a1Q8K4Z5 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3a1Q8K4Z5 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3a1Q8K4Z5 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3a1Q8K4Z5 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Sf3a1Q8K4Z5 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3a1Q8K4Z5 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Sf3a1Q8K4Z5 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3a1Q8K4Z5 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC14.95□□□□□ -0.02
Sf3a1Q8K4Z5 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3a1Q8K4Z5 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3a1Q8K4Z5 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3a1Q8K4Z5 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms