Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ddx54Q8K4L0 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ddx54Q8K4L0 Gm3150-201ENSMUST00000166418 204 ntBASIC15.93■□□□□ 0.14
Ddx54Q8K4L0 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ddx54Q8K4L0 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ddx54Q8K4L0 Gm29763-201ENSMUST00000205306 616 ntBASIC15.93■□□□□ 0.14
Ddx54Q8K4L0 Gm14005-208ENSMUST00000223654 681 ntBASIC15.93■□□□□ 0.14
Ddx54Q8K4L0 AC093022.5-201ENSMUST00000226841 1079 ntBASIC15.93■□□□□ 0.14
Ddx54Q8K4L0 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ddx54Q8K4L0 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ddx54Q8K4L0 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ddx54Q8K4L0 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Ddx54Q8K4L0 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.93■□□□□ 0.14
Ddx54Q8K4L0 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC15.93■□□□□ 0.14
Ddx54Q8K4L0 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ddx54Q8K4L0 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Ddx54Q8K4L0 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ddx54Q8K4L0 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ddx54Q8K4L0 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Ddx54Q8K4L0 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
Ddx54Q8K4L0 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx54Q8K4L0 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx54Q8K4L0 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx54Q8K4L0 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx54Q8K4L0 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC15.92■□□□□ 0.14
Ddx54Q8K4L0 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx54Q8K4L0 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC15.92■□□□□ 0.14
Ddx54Q8K4L0 AC154671.1-201ENSMUST00000228617 1578 ntBASIC15.92■□□□□ 0.14
Ddx54Q8K4L0 Gm5641-201ENSMUST00000091130 1488 ntBASIC15.92■□□□□ 0.14
Ddx54Q8K4L0 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx54Q8K4L0 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx54Q8K4L0 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx54Q8K4L0 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx54Q8K4L0 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Ddx54Q8K4L0 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.92■□□□□ 0.14
Ddx54Q8K4L0 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC15.92■□□□□ 0.14
Ddx54Q8K4L0 Gm11619-201ENSMUST00000117474 237 ntBASIC15.92■□□□□ 0.14
Ddx54Q8K4L0 Gm11578-201ENSMUST00000118530 459 ntBASIC15.92■□□□□ 0.14
Ddx54Q8K4L0 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
Ddx54Q8K4L0 Gm37981-201ENSMUST00000194280 535 ntBASIC15.92■□□□□ 0.14
Ddx54Q8K4L0 Gm44315-201ENSMUST00000203041 219 ntBASIC15.92■□□□□ 0.14
Ddx54Q8K4L0 Gm40879-201ENSMUST00000220759 612 ntBASIC15.92■□□□□ 0.14
Ddx54Q8K4L0 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Ddx54Q8K4L0 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx54Q8K4L0 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Ddx54Q8K4L0 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx54Q8K4L0 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Ddx54Q8K4L0 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx54Q8K4L0 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx54Q8K4L0 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx54Q8K4L0 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 Gm7719-201ENSMUST00000182374 975 ntBASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 Gm9916-201ENSMUST00000192943 1228 ntBASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 Gm3433-201ENSMUST00000210149 1058 ntBASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 Gm6390-201ENSMUST00000215034 589 ntBASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx54Q8K4L0 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx54Q8K4L0 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx54Q8K4L0 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
Ddx54Q8K4L0 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC15.9■□□□□ 0.14
Ddx54Q8K4L0 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx54Q8K4L0 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC15.9■□□□□ 0.14
Ddx54Q8K4L0 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx54Q8K4L0 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx54Q8K4L0 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms