Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Gm16166-201ENSMUST00000118291 787 ntBASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Gm13937-201ENSMUST00000121000 988 ntBASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rtn4rl1Q8K0S5 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Gm5706-201ENSMUST00000181525 993 ntBASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Gm29499-201ENSMUST00000189151 486 ntBASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Gm28329-201ENSMUST00000191208 689 ntBASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Gm29171-201ENSMUST00000191397 486 ntBASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rtn4rl1Q8K0S5 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms