Protein–RNA interactions for Protein: Q8CHC4

Synj1, Synaptojanin-1, mousemouse

Predictions only

Length 1,574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Synj1Q8CHC4 Gm11578-201ENSMUST00000118530 459 ntBASIC20.27■□□□□ 0.84
Synj1Q8CHC4 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Synj1Q8CHC4 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Synj1Q8CHC4 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Synj1Q8CHC4 Gm45779-201ENSMUST00000212189 4064 ntBASIC20.27■□□□□ 0.84
Synj1Q8CHC4 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Synj1Q8CHC4 Ptprs-211ENSMUST00000223859 5588 ntBASIC20.27■□□□□ 0.83
Synj1Q8CHC4 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Synj1Q8CHC4 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Synj1Q8CHC4 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC20.27■□□□□ 0.83
Synj1Q8CHC4 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Synj1Q8CHC4 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Synj1Q8CHC4 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Synj1Q8CHC4 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC20.26■□□□□ 0.83
Synj1Q8CHC4 Gm10728-201ENSMUST00000194292 1829 ntBASIC20.26■□□□□ 0.83
Synj1Q8CHC4 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Synj1Q8CHC4 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Synj1Q8CHC4 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Synj1Q8CHC4 Gm5257-201ENSMUST00000121823 790 ntBASIC20.26■□□□□ 0.83
Synj1Q8CHC4 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Synj1Q8CHC4 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC20.26■□□□□ 0.83
Synj1Q8CHC4 AC134248.1-201ENSMUST00000216113 1176 ntBASIC20.26■□□□□ 0.83
Synj1Q8CHC4 CT025602.2-201ENSMUST00000226553 772 ntBASIC20.26■□□□□ 0.83
Synj1Q8CHC4 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Synj1Q8CHC4 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Synj1Q8CHC4 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Synj1Q8CHC4 Gm43334-201ENSMUST00000197740 1318 ntBASIC20.26■□□□□ 0.83
Synj1Q8CHC4 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC20.26■□□□□ 0.83
Synj1Q8CHC4 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Synj1Q8CHC4 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Synj1Q8CHC4 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Synj1Q8CHC4 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Synj1Q8CHC4 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Gm11619-201ENSMUST00000117474 237 ntBASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Gm12247-201ENSMUST00000117585 670 ntBASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Gm14270-201ENSMUST00000118388 846 ntBASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Synj1Q8CHC4 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Gm26982-201ENSMUST00000182250 1151 ntBASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Gm9081-201ENSMUST00000182346 991 ntBASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Gm43778-201ENSMUST00000199438 199 ntBASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Gm44124-201ENSMUST00000204159 472 ntBASIC20.25■□□□□ 0.83
Synj1Q8CHC4 AC153962.2-201ENSMUST00000219417 550 ntBASIC20.25■□□□□ 0.83
Synj1Q8CHC4 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC20.25■□□□□ 0.83
Synj1Q8CHC4 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Synj1Q8CHC4 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Ssr1-203ENSMUST00000225246 1825 ntBASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Gm12948-201ENSMUST00000119406 682 ntBASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Gm24809-201ENSMUST00000175318 271 ntBASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Gm28833-201ENSMUST00000189671 559 ntBASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Gm5996-201ENSMUST00000211110 718 ntBASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Synj1Q8CHC4 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Synj1Q8CHC4 Gm1840-201ENSMUST00000051687 1432 ntBASIC20.24■□□□□ 0.83
Synj1Q8CHC4 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Synj1Q8CHC4 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Synj1Q8CHC4 Gm37861-201ENSMUST00000193534 2869 ntBASIC20.24■□□□□ 0.83
Synj1Q8CHC4 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Synj1Q8CHC4 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Synj1Q8CHC4 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Synj1Q8CHC4 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Synj1Q8CHC4 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Synj1Q8CHC4 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC20.24■□□□□ 0.83
Synj1Q8CHC4 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Synj1Q8CHC4 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Synj1Q8CHC4 Gm7741-201ENSMUST00000181445 989 ntBASIC20.24■□□□□ 0.83
Synj1Q8CHC4 AC153152.3-201ENSMUST00000222188 1135 ntBASIC20.24■□□□□ 0.83
Synj1Q8CHC4 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Synj1Q8CHC4 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Synj1Q8CHC4 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Synj1Q8CHC4 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Synj1Q8CHC4 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Synj1Q8CHC4 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Synj1Q8CHC4 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms