Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 Gm5187-201ENSMUST00000117317 991 ntBASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 Gm13392-201ENSMUST00000117708 150 ntBASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 Gm27572-201ENSMUST00000183702 255 ntBASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc87Q8CDL9 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ccdc87Q8CDL9 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ccdc87Q8CDL9 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc87Q8CDL9 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.98□□□□□ -0.33
Ccdc87Q8CDL9 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc87Q8CDL9 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc87Q8CDL9 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc87Q8CDL9 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.98□□□□□ -0.33
Ccdc87Q8CDL9 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc87Q8CDL9 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.98□□□□□ -0.33
Ccdc87Q8CDL9 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc87Q8CDL9 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc87Q8CDL9 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc87Q8CDL9 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc87Q8CDL9 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc87Q8CDL9 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.98□□□□□ -0.33
Ccdc87Q8CDL9 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ccdc87Q8CDL9 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc87Q8CDL9 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc87Q8CDL9 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc87Q8CDL9 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc87Q8CDL9 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.98□□□□□ -0.33
Ccdc87Q8CDL9 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.98□□□□□ -0.33
Ccdc87Q8CDL9 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.98□□□□□ -0.33
Ccdc87Q8CDL9 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.98□□□□□ -0.33
Ccdc87Q8CDL9 Gm24526-201ENSMUST00000082921 158 ntBASIC12.98□□□□□ -0.33
Ccdc87Q8CDL9 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc87Q8CDL9 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.98□□□□□ -0.33
Ccdc87Q8CDL9 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc87Q8CDL9 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc87Q8CDL9 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc87Q8CDL9 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.98□□□□□ -0.33
Ccdc87Q8CDL9 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc87Q8CDL9 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc87Q8CDL9 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc87Q8CDL9 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc87Q8CDL9 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 Gm19163-201ENSMUST00000223313 780 ntBASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 AC154532.1-201ENSMUST00000227860 965 ntBASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms