Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps53Q8CCB4 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps53Q8CCB4 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vps53Q8CCB4 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps53Q8CCB4 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps53Q8CCB4 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vps53Q8CCB4 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.28□□□□□ -0.12
Vps53Q8CCB4 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vps53Q8CCB4 Gm19221-201ENSMUST00000221827 1477 ntBASIC14.28□□□□□ -0.12
Vps53Q8CCB4 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps53Q8CCB4 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps53Q8CCB4 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps53Q8CCB4 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps53Q8CCB4 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps53Q8CCB4 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
Vps53Q8CCB4 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Vps53Q8CCB4 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.27□□□□□ -0.12
Vps53Q8CCB4 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC14.27□□□□□ -0.12
Vps53Q8CCB4 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps53Q8CCB4 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps53Q8CCB4 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps53Q8CCB4 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vps53Q8CCB4 AC167669.2-201ENSMUST00000224417 1620 ntBASIC14.27□□□□□ -0.12
Vps53Q8CCB4 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Vps53Q8CCB4 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps53Q8CCB4 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps53Q8CCB4 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Vps53Q8CCB4 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps53Q8CCB4 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps53Q8CCB4 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vps53Q8CCB4 Gm4366-201ENSMUST00000201488 1342 ntBASIC14.27□□□□□ -0.12
Vps53Q8CCB4 Gm11531-201ENSMUST00000117614 555 ntBASIC14.27□□□□□ -0.13
Vps53Q8CCB4 Gm11930-201ENSMUST00000117788 190 ntBASIC14.27□□□□□ -0.13
Vps53Q8CCB4 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC14.27□□□□□ -0.13
Vps53Q8CCB4 B9d1os-201ENSMUST00000137010 674 ntBASIC14.27□□□□□ -0.13
Vps53Q8CCB4 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC14.27□□□□□ -0.13
Vps53Q8CCB4 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.27□□□□□ -0.13
Vps53Q8CCB4 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Vps53Q8CCB4 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Vps53Q8CCB4 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.27□□□□□ -0.13
Vps53Q8CCB4 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vps53Q8CCB4 Gm2546-201ENSMUST00000182630 991 ntBASIC14.27□□□□□ -0.13
Vps53Q8CCB4 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC14.27□□□□□ -0.13
Vps53Q8CCB4 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vps53Q8CCB4 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.27□□□□□ -0.13
Vps53Q8CCB4 Gm5950-201ENSMUST00000213337 772 ntBASIC14.27□□□□□ -0.13
Vps53Q8CCB4 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.27□□□□□ -0.13
Vps53Q8CCB4 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps53Q8CCB4 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps53Q8CCB4 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps53Q8CCB4 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps53Q8CCB4 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps53Q8CCB4 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps53Q8CCB4 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.27□□□□□ -0.13
Vps53Q8CCB4 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.27□□□□□ -0.13
Vps53Q8CCB4 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC14.27□□□□□ -0.13
Vps53Q8CCB4 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Vps53Q8CCB4 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps53Q8CCB4 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
Vps53Q8CCB4 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps53Q8CCB4 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps53Q8CCB4 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps53Q8CCB4 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps53Q8CCB4 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps53Q8CCB4 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps53Q8CCB4 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps53Q8CCB4 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps53Q8CCB4 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps53Q8CCB4 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps53Q8CCB4 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps53Q8CCB4 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps53Q8CCB4 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps53Q8CCB4 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC14.26□□□□□ -0.13
Vps53Q8CCB4 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps53Q8CCB4 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps53Q8CCB4 Gstp-ps-201ENSMUST00000195526 631 ntBASIC14.26□□□□□ -0.13
Vps53Q8CCB4 Gm38092-201ENSMUST00000195600 653 ntBASIC14.26□□□□□ -0.13
Vps53Q8CCB4 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.26□□□□□ -0.13
Vps53Q8CCB4 Gm9004-201ENSMUST00000218739 1222 ntBASIC14.26□□□□□ -0.13
Vps53Q8CCB4 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC14.26□□□□□ -0.13
Vps53Q8CCB4 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps53Q8CCB4 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps53Q8CCB4 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Vps53Q8CCB4 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps53Q8CCB4 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps53Q8CCB4 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps53Q8CCB4 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps53Q8CCB4 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Vps53Q8CCB4 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps53Q8CCB4 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps53Q8CCB4 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
Vps53Q8CCB4 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Vps53Q8CCB4 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vps53Q8CCB4 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps53Q8CCB4 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps53Q8CCB4 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.25□□□□□ -0.13
Vps53Q8CCB4 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps53Q8CCB4 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.25□□□□□ -0.13
Vps53Q8CCB4 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vps53Q8CCB4 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms