Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm25881-201ENSMUST00000157783 103 ntBASIC12.4□□□□□ -0.42
Sh3rf2Q8BZT2 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Sh3rf2Q8BZT2 Gm43184-201ENSMUST00000197247 542 ntBASIC12.4□□□□□ -0.42
Sh3rf2Q8BZT2 Gm44882-201ENSMUST00000205702 802 ntBASIC12.4□□□□□ -0.42
Sh3rf2Q8BZT2 Gm4607-201ENSMUST00000206649 577 ntBASIC12.4□□□□□ -0.42
Sh3rf2Q8BZT2 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sh3rf2Q8BZT2 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sh3rf2Q8BZT2 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sh3rf2Q8BZT2 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sh3rf2Q8BZT2 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sh3rf2Q8BZT2 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.4□□□□□ -0.42
Sh3rf2Q8BZT2 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sh3rf2Q8BZT2 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Sh3rf2Q8BZT2 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sh3rf2Q8BZT2 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sh3rf2Q8BZT2 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sh3rf2Q8BZT2 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sh3rf2Q8BZT2 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sh3rf2Q8BZT2 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Gm23596-201ENSMUST00000104304 132 ntBASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Gm14058-201ENSMUST00000116082 735 ntBASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Gm12501-201ENSMUST00000119163 529 ntBASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Gm9555-201ENSMUST00000200908 583 ntBASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Gm807-202ENSMUST00000224929 408 ntBASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Gm26448-201ENSMUST00000082446 203 ntBASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Gm21811-201ENSMUST00000096485 930 ntBASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Sh3rf2Q8BZT2 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Gm13035-201ENSMUST00000117496 342 ntBASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Gm12196-201ENSMUST00000120954 262 ntBASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.38□□□□□ -0.43
Sh3rf2Q8BZT2 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms