Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Myo15-202ENSMUST00000081823 7953 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Gm8227-201ENSMUST00000223306 571 ntBASIC10.07□□□□□ -0.8
Smco3Q8BQM7 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.07□□□□□ -0.8
Smco3Q8BQM7 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC10.06□□□□□ -0.8
Smco3Q8BQM7 Gm38049-201ENSMUST00000195698 1372 ntBASIC10.06□□□□□ -0.8
Smco3Q8BQM7 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 Gm13616-201ENSMUST00000120600 222 ntBASIC10.06□□□□□ -0.8
Smco3Q8BQM7 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 AC132317.1-201ENSMUST00000227227 962 ntBASIC10.06□□□□□ -0.8
Smco3Q8BQM7 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 Gm6263-201ENSMUST00000120029 1342 ntBASIC10.06□□□□□ -0.8
Smco3Q8BQM7 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smco3Q8BQM7 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms