Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.55□□□□□ -0.4
Chmp2bQ8BJF9 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2bQ8BJF9 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2bQ8BJF9 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Chmp2bQ8BJF9 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.55□□□□□ -0.4
Chmp2bQ8BJF9 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2bQ8BJF9 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2bQ8BJF9 Gm12490-201ENSMUST00000120255 560 ntBASIC12.55□□□□□ -0.4
Chmp2bQ8BJF9 Gm13315-201ENSMUST00000120376 991 ntBASIC12.55□□□□□ -0.4
Chmp2bQ8BJF9 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.55□□□□□ -0.4
Chmp2bQ8BJF9 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2bQ8BJF9 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.55□□□□□ -0.4
Chmp2bQ8BJF9 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.55□□□□□ -0.4
Chmp2bQ8BJF9 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.55□□□□□ -0.4
Chmp2bQ8BJF9 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2bQ8BJF9 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2bQ8BJF9 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2bQ8BJF9 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2bQ8BJF9 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2bQ8BJF9 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2bQ8BJF9 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Chmp2bQ8BJF9 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Chmp2bQ8BJF9 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.55□□□□□ -0.4
Chmp2bQ8BJF9 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2bQ8BJF9 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2bQ8BJF9 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2bQ8BJF9 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2bQ8BJF9 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2bQ8BJF9 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.55□□□□□ -0.4
Chmp2bQ8BJF9 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.55□□□□□ -0.4
Chmp2bQ8BJF9 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2bQ8BJF9 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2bQ8BJF9 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.55□□□□□ -0.4
Chmp2bQ8BJF9 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2bQ8BJF9 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Chmp2bQ8BJF9 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.54□□□□□ -0.4
Chmp2bQ8BJF9 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Chmp2bQ8BJF9 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.54□□□□□ -0.4
Chmp2bQ8BJF9 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2bQ8BJF9 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2bQ8BJF9 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2bQ8BJF9 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2bQ8BJF9 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2bQ8BJF9 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2bQ8BJF9 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2bQ8BJF9 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
Chmp2bQ8BJF9 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.54□□□□□ -0.4
Chmp2bQ8BJF9 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2bQ8BJF9 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.54□□□□□ -0.4
Chmp2bQ8BJF9 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2bQ8BJF9 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2bQ8BJF9 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2bQ8BJF9 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.54□□□□□ -0.4
Chmp2bQ8BJF9 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.54□□□□□ -0.4
Chmp2bQ8BJF9 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2bQ8BJF9 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2bQ8BJF9 Gm10268-201ENSMUST00000085340 555 ntBASIC12.54□□□□□ -0.4
Chmp2bQ8BJF9 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Chmp2bQ8BJF9 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2bQ8BJF9 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2bQ8BJF9 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.54□□□□□ -0.4
Chmp2bQ8BJF9 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2bQ8BJF9 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2bQ8BJF9 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2bQ8BJF9 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2bQ8BJF9 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Chmp2bQ8BJF9 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2bQ8BJF9 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2bQ8BJF9 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Chmp2bQ8BJF9 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2bQ8BJF9 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 Gm26927-201ENSMUST00000182385 965 ntBASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 Gm27682-201ENSMUST00000183930 110 ntBASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2bQ8BJF9 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms