Protein–RNA interactions for Protein: Q811W0

Sox21, Transcription factor SOX-21, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox21Q811W0 Gm5070-201ENSMUST00000177599 862 ntBASIC10.06□□□□□ -0.8
Sox21Q811W0 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sox21Q811W0 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.06□□□□□ -0.8
Sox21Q811W0 Gm8856-201ENSMUST00000185254 1144 ntBASIC10.06□□□□□ -0.8
Sox21Q811W0 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC10.06□□□□□ -0.8
Sox21Q811W0 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.06□□□□□ -0.8
Sox21Q811W0 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sox21Q811W0 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sox21Q811W0 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sox21Q811W0 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sox21Q811W0 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sox21Q811W0 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sox21Q811W0 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sox21Q811W0 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sox21Q811W0 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sox21Q811W0 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sox21Q811W0 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sox21Q811W0 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sox21Q811W0 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sox21Q811W0 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Sox21Q811W0 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sox21Q811W0 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sox21Q811W0 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox21Q811W0 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox21Q811W0 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox21Q811W0 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox21Q811W0 Gm37324-201ENSMUST00000194500 4504 ntBASIC10.05□□□□□ -0.8
Sox21Q811W0 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.05□□□□□ -0.8
Sox21Q811W0 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sox21Q811W0 Gm43908-201ENSMUST00000205074 1472 ntBASIC10.05□□□□□ -0.8
Sox21Q811W0 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Sox21Q811W0 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox21Q811W0 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox21Q811W0 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox21Q811W0 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sox21Q811W0 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox21Q811W0 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox21Q811W0 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sox21Q811W0 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.05□□□□□ -0.8
Sox21Q811W0 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox21Q811W0 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox21Q811W0 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox21Q811W0 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox21Q811W0 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.05□□□□□ -0.8
Sox21Q811W0 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC10.05□□□□□ -0.8
Sox21Q811W0 Gm14832-201ENSMUST00000121289 322 ntBASIC10.05□□□□□ -0.8
Sox21Q811W0 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.05□□□□□ -0.8
Sox21Q811W0 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC10.05□□□□□ -0.8
Sox21Q811W0 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.05□□□□□ -0.8
Sox21Q811W0 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.05□□□□□ -0.8
Sox21Q811W0 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC10.05□□□□□ -0.8
Sox21Q811W0 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.05□□□□□ -0.8
Sox21Q811W0 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox21Q811W0 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.05□□□□□ -0.8
Sox21Q811W0 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC10.05□□□□□ -0.8
Sox21Q811W0 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sox21Q811W0 Mir6927-201ENSMUST00000184494 71 ntBASIC10.05□□□□□ -0.8
Sox21Q811W0 Gm28450-201ENSMUST00000187349 638 ntBASIC10.05□□□□□ -0.8
Sox21Q811W0 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sox21Q811W0 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.05□□□□□ -0.8
Sox21Q811W0 Gm18212-201ENSMUST00000211678 889 ntBASIC10.05□□□□□ -0.8
Sox21Q811W0 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC10.05□□□□□ -0.8
Sox21Q811W0 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.05□□□□□ -0.8
Sox21Q811W0 AC154222.2-201ENSMUST00000225848 607 ntBASIC10.05□□□□□ -0.8
Sox21Q811W0 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox21Q811W0 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox21Q811W0 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Sox21Q811W0 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Sox21Q811W0 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Sox21Q811W0 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox21Q811W0 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox21Q811W0 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox21Q811W0 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox21Q811W0 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox21Q811W0 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sox21Q811W0 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox21Q811W0 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox21Q811W0 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Sox21Q811W0 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Sox21Q811W0 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.05□□□□□ -0.8
Sox21Q811W0 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sox21Q811W0 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox21Q811W0 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.05□□□□□ -0.8
Sox21Q811W0 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox21Q811W0 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox21Q811W0 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox21Q811W0 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox21Q811W0 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Sox21Q811W0 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Sox21Q811W0 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sox21Q811W0 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sox21Q811W0 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.04□□□□□ -0.8
Sox21Q811W0 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sox21Q811W0 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sox21Q811W0 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sox21Q811W0 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sox21Q811W0 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sox21Q811W0 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sox21Q811W0 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.04□□□□□ -0.8
Sox21Q811W0 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms