Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 Gm12566-201ENSMUST00000121479 359 ntBASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 Mir7677-201ENSMUST00000184226 67 ntBASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Ubfd1Q78JW9 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Gm11511-201ENSMUST00000118146 540 ntBASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 AU022133-201ENSMUST00000200601 873 ntBASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Gm270-201ENSMUST00000223010 976 ntBASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ubfd1Q78JW9 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubfd1Q78JW9 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubfd1Q78JW9 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ubfd1Q78JW9 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Ubfd1Q78JW9 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ubfd1Q78JW9 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubfd1Q78JW9 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubfd1Q78JW9 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms