Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rif1Q6PR54 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rif1Q6PR54 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Rif1Q6PR54 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rif1Q6PR54 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC10.37□□□□□ -0.75
Rif1Q6PR54 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC10.36□□□□□ -0.75
Rif1Q6PR54 Gm13351-201ENSMUST00000118087 414 ntBASIC10.36□□□□□ -0.75
Rif1Q6PR54 Mir1905-201ENSMUST00000122779 82 ntBASIC10.36□□□□□ -0.75
Rif1Q6PR54 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rif1Q6PR54 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC10.36□□□□□ -0.75
Rif1Q6PR54 Gm5650-201ENSMUST00000209641 598 ntBASIC10.36□□□□□ -0.75
Rif1Q6PR54 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Gm19994-201ENSMUST00000217086 586 ntBASIC10.36□□□□□ -0.75
Rif1Q6PR54 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Sidt2-202ENSMUST00000114573 4012 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Rif1Q6PR54 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rif1Q6PR54 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Gm15136-201ENSMUST00000120552 533 ntBASIC10.36□□□□□ -0.75
Rif1Q6PR54 Gm12906-201ENSMUST00000154610 441 ntBASIC10.36□□□□□ -0.75
Rif1Q6PR54 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Fbxl12-205ENSMUST00000140702 1555 ntBASIC10.36□□□□□ -0.75
Rif1Q6PR54 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rif1Q6PR54 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rif1Q6PR54 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rif1Q6PR54 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Gm22661-201ENSMUST00000104192 132 ntBASIC10.35□□□□□ -0.75
Rif1Q6PR54 Gm23595-201ENSMUST00000104306 130 ntBASIC10.35□□□□□ -0.75
Rif1Q6PR54 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Gm2474-201ENSMUST00000195162 559 ntBASIC10.35□□□□□ -0.75
Rif1Q6PR54 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Mir341-201ENSMUST00000093593 96 ntBASIC10.35□□□□□ -0.75
Rif1Q6PR54 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rif1Q6PR54 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rif1Q6PR54 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC10.35□□□□□ -0.75
Rif1Q6PR54 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms