Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Slc46a1Q6PEM8 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.67
Slc46a1Q6PEM8 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Slc46a1Q6PEM8 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Gm12314-201ENSMUST00000118104 538 ntBASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Gm5070-201ENSMUST00000177599 862 ntBASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Rprl1-202ENSMUST00000198476 238 ntBASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Gm9445-201ENSMUST00000207454 1285 ntBASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Gm9333-201ENSMUST00000205452 1323 ntBASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc46a1Q6PEM8 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Slc46a1Q6PEM8 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Slc46a1Q6PEM8 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc46a1Q6PEM8 Gm43289-201ENSMUST00000200537 1475 ntBASIC10.82□□□□□ -0.68
Slc46a1Q6PEM8 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc46a1Q6PEM8 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.82□□□□□ -0.68
Slc46a1Q6PEM8 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc46a1Q6PEM8 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Slc46a1Q6PEM8 Gm43463-201ENSMUST00000195967 1803 ntBASIC10.82□□□□□ -0.68
Slc46a1Q6PEM8 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Slc46a1Q6PEM8 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc46a1Q6PEM8 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Slc46a1Q6PEM8 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.82□□□□□ -0.68
Slc46a1Q6PEM8 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc46a1Q6PEM8 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc46a1Q6PEM8 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Slc46a1Q6PEM8 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc46a1Q6PEM8 Gm12217-201ENSMUST00000118858 696 ntBASIC10.82□□□□□ -0.68
Slc46a1Q6PEM8 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Slc46a1Q6PEM8 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.82□□□□□ -0.68
Slc46a1Q6PEM8 Gm28450-201ENSMUST00000187349 638 ntBASIC10.82□□□□□ -0.68
Slc46a1Q6PEM8 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Slc46a1Q6PEM8 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Slc46a1Q6PEM8 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.82□□□□□ -0.68
Slc46a1Q6PEM8 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Slc46a1Q6PEM8 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Slc46a1Q6PEM8 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc46a1Q6PEM8 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc46a1Q6PEM8 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc46a1Q6PEM8 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc46a1Q6PEM8 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc46a1Q6PEM8 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms