Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt39Q6IFX4 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt39Q6IFX4 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt39Q6IFX4 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Krt39Q6IFX4 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.52□□□□□ -0.25
Krt39Q6IFX4 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt39Q6IFX4 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.52□□□□□ -0.25
Krt39Q6IFX4 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.52□□□□□ -0.25
Krt39Q6IFX4 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt39Q6IFX4 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Krt39Q6IFX4 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt39Q6IFX4 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt39Q6IFX4 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt39Q6IFX4 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt39Q6IFX4 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt39Q6IFX4 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt39Q6IFX4 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt39Q6IFX4 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt39Q6IFX4 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt39Q6IFX4 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt39Q6IFX4 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Gm13736-201ENSMUST00000119272 253 ntBASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Gm14660-201ENSMUST00000119809 575 ntBASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Gm11591-201ENSMUST00000120063 702 ntBASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Gm8738-201ENSMUST00000172606 329 ntBASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Gm6222-202ENSMUST00000182143 629 ntBASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Mir7085-201ENSMUST00000184353 66 ntBASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Gm44405-201ENSMUST00000198952 126 ntBASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt39Q6IFX4 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Krt39Q6IFX4 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Krt39Q6IFX4 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Krt39Q6IFX4 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Krt39Q6IFX4 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.5□□□□□ -0.25
Krt39Q6IFX4 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.5□□□□□ -0.25
Krt39Q6IFX4 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Krt39Q6IFX4 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Krt39Q6IFX4 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Krt39Q6IFX4 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Krt39Q6IFX4 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Krt39Q6IFX4 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.5□□□□□ -0.25
Krt39Q6IFX4 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Krt39Q6IFX4 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.5□□□□□ -0.25
Krt39Q6IFX4 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Krt39Q6IFX4 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Krt39Q6IFX4 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Krt39Q6IFX4 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Krt39Q6IFX4 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Krt39Q6IFX4 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC13.5□□□□□ -0.25
Krt39Q6IFX4 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Krt39Q6IFX4 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Krt39Q6IFX4 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Krt39Q6IFX4 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Krt39Q6IFX4 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Krt39Q6IFX4 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Krt39Q6IFX4 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Krt39Q6IFX4 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.49□□□□□ -0.25
Krt39Q6IFX4 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms