Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scube3Q66PY1 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scube3Q66PY1 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scube3Q66PY1 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scube3Q66PY1 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Scube3Q66PY1 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scube3Q66PY1 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scube3Q66PY1 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.01□□□□□ -0.33
Scube3Q66PY1 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Scube3Q66PY1 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC13.01□□□□□ -0.33
Scube3Q66PY1 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.01□□□□□ -0.33
Scube3Q66PY1 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scube3Q66PY1 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.01□□□□□ -0.33
Scube3Q66PY1 Gm23757-201ENSMUST00000158353 100 ntBASIC13.01□□□□□ -0.33
Scube3Q66PY1 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.01□□□□□ -0.33
Scube3Q66PY1 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Scube3Q66PY1 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scube3Q66PY1 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.01□□□□□ -0.33
Scube3Q66PY1 Gm28180-201ENSMUST00000189608 722 ntBASIC13.01□□□□□ -0.33
Scube3Q66PY1 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scube3Q66PY1 Gm43068-201ENSMUST00000201095 1273 ntBASIC13.01□□□□□ -0.33
Scube3Q66PY1 Gm3786-201ENSMUST00000202659 378 ntBASIC13.01□□□□□ -0.33
Scube3Q66PY1 Gm7439-201ENSMUST00000214053 835 ntBASIC13.01□□□□□ -0.33
Scube3Q66PY1 Gm6082-201ENSMUST00000215204 454 ntBASIC13.01□□□□□ -0.33
Scube3Q66PY1 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.01□□□□□ -0.33
Scube3Q66PY1 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.01□□□□□ -0.33
Scube3Q66PY1 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scube3Q66PY1 Gm10312-201ENSMUST00000078515 489 ntBASIC13.01□□□□□ -0.33
Scube3Q66PY1 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.01□□□□□ -0.33
Scube3Q66PY1 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scube3Q66PY1 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.01□□□□□ -0.33
Scube3Q66PY1 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scube3Q66PY1 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scube3Q66PY1 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scube3Q66PY1 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scube3Q66PY1 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scube3Q66PY1 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scube3Q66PY1 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scube3Q66PY1 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scube3Q66PY1 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scube3Q66PY1 Gm37391-201ENSMUST00000194891 2318 ntBASIC13□□□□□ -0.33
Scube3Q66PY1 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scube3Q66PY1 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Scube3Q66PY1 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13□□□□□ -0.33
Scube3Q66PY1 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scube3Q66PY1 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scube3Q66PY1 Gm15061-201ENSMUST00000121076 1046 ntBASIC13□□□□□ -0.33
Scube3Q66PY1 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scube3Q66PY1 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scube3Q66PY1 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scube3Q66PY1 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Scube3Q66PY1 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scube3Q66PY1 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13□□□□□ -0.33
Scube3Q66PY1 Gm27046-201ENSMUST00000182160 463 ntBASIC13□□□□□ -0.33
Scube3Q66PY1 Gm21118-202ENSMUST00000187418 1219 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scube3Q66PY1 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scube3Q66PY1 Gm38000-201ENSMUST00000192390 1215 ntBASIC13□□□□□ -0.33
Scube3Q66PY1 Gm37684-201ENSMUST00000192779 355 ntBASIC13□□□□□ -0.33
Scube3Q66PY1 Gm38247-201ENSMUST00000194675 433 ntBASIC13□□□□□ -0.33
Scube3Q66PY1 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC13□□□□□ -0.33
Scube3Q66PY1 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scube3Q66PY1 Gm44552-201ENSMUST00000205458 1247 ntBASIC13□□□□□ -0.33
Scube3Q66PY1 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Scube3Q66PY1 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Scube3Q66PY1 AC153529.1-201ENSMUST00000217818 370 ntBASIC13□□□□□ -0.33
Scube3Q66PY1 Gm272-201ENSMUST00000222073 919 ntBASIC13□□□□□ -0.33
Scube3Q66PY1 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC13□□□□□ -0.33
Scube3Q66PY1 AC166344.1-202ENSMUST00000224139 234 ntBASIC13□□□□□ -0.33
Scube3Q66PY1 AC126253.1-202ENSMUST00000226732 835 ntBASIC13□□□□□ -0.33
Scube3Q66PY1 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scube3Q66PY1 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scube3Q66PY1 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC13□□□□□ -0.33
Scube3Q66PY1 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC13□□□□□ -0.33
Scube3Q66PY1 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Scube3Q66PY1 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Scube3Q66PY1 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scube3Q66PY1 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scube3Q66PY1 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scube3Q66PY1 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Scube3Q66PY1 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scube3Q66PY1 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13□□□□□ -0.33
Scube3Q66PY1 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Scube3Q66PY1 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scube3Q66PY1 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.99□□□□□ -0.33
Scube3Q66PY1 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scube3Q66PY1 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Scube3Q66PY1 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scube3Q66PY1 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scube3Q66PY1 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scube3Q66PY1 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scube3Q66PY1 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scube3Q66PY1 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Scube3Q66PY1 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scube3Q66PY1 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Scube3Q66PY1 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scube3Q66PY1 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scube3Q66PY1 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Scube3Q66PY1 Mir669o-201ENSMUST00000103898 96 ntBASIC12.99□□□□□ -0.33
Scube3Q66PY1 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scube3Q66PY1 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms