Protein–RNA interactions for Protein: Q61458

Ccnh, Cyclin-H, mousemouse

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnhQ61458 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CcnhQ61458 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CcnhQ61458 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CcnhQ61458 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.54□□□□□ -0.4
CcnhQ61458 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
CcnhQ61458 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnhQ61458 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.53□□□□□ -0.4
CcnhQ61458 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnhQ61458 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnhQ61458 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CcnhQ61458 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnhQ61458 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
CcnhQ61458 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnhQ61458 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnhQ61458 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnhQ61458 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnhQ61458 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnhQ61458 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.53□□□□□ -0.4
CcnhQ61458 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnhQ61458 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.53□□□□□ -0.4
CcnhQ61458 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.53□□□□□ -0.4
CcnhQ61458 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.53□□□□□ -0.4
CcnhQ61458 Gm24990-201ENSMUST00000157406 323 ntBASIC12.53□□□□□ -0.4
CcnhQ61458 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CcnhQ61458 Gm19187-201ENSMUST00000206781 892 ntBASIC12.53□□□□□ -0.4
CcnhQ61458 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.53□□□□□ -0.4
CcnhQ61458 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnhQ61458 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CcnhQ61458 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnhQ61458 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnhQ61458 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnhQ61458 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnhQ61458 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnhQ61458 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.53□□□□□ -0.4
CcnhQ61458 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CcnhQ61458 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CcnhQ61458 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnhQ61458 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.53□□□□□ -0.4
CcnhQ61458 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnhQ61458 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnhQ61458 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnhQ61458 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CcnhQ61458 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnhQ61458 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnhQ61458 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnhQ61458 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CcnhQ61458 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnhQ61458 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnhQ61458 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CcnhQ61458 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CcnhQ61458 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CcnhQ61458 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
CcnhQ61458 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.52□□□□□ -0.4
CcnhQ61458 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
CcnhQ61458 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
CcnhQ61458 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CcnhQ61458 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
CcnhQ61458 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CcnhQ61458 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
CcnhQ61458 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CcnhQ61458 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CcnhQ61458 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CcnhQ61458 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CcnhQ61458 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CcnhQ61458 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CcnhQ61458 Gm24934-201ENSMUST00000103764 111 ntBASIC12.52□□□□□ -0.41
CcnhQ61458 Gm16570-201ENSMUST00000161951 436 ntBASIC12.52□□□□□ -0.41
CcnhQ61458 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CcnhQ61458 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CcnhQ61458 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CcnhQ61458 Gm32999-201ENSMUST00000192693 562 ntBASIC12.52□□□□□ -0.41
CcnhQ61458 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.52□□□□□ -0.41
CcnhQ61458 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.52□□□□□ -0.41
CcnhQ61458 Gm45598-202ENSMUST00000210719 986 ntBASIC12.52□□□□□ -0.41
CcnhQ61458 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.52□□□□□ -0.41
CcnhQ61458 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.52□□□□□ -0.41
CcnhQ61458 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.52□□□□□ -0.41
CcnhQ61458 Gm9996-201ENSMUST00000070359 913 ntBASIC12.52□□□□□ -0.41
CcnhQ61458 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CcnhQ61458 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CcnhQ61458 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CcnhQ61458 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CcnhQ61458 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.52□□□□□ -0.41
CcnhQ61458 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CcnhQ61458 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CcnhQ61458 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CcnhQ61458 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CcnhQ61458 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
CcnhQ61458 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.52□□□□□ -0.41
CcnhQ61458 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CcnhQ61458 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CcnhQ61458 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
CcnhQ61458 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CcnhQ61458 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CcnhQ61458 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CcnhQ61458 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CcnhQ61458 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CcnhQ61458 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CcnhQ61458 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CcnhQ61458 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms