Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col12a1Q60847 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Col12a1Q60847 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col12a1Q60847 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col12a1Q60847 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col12a1Q60847 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col12a1Q60847 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Col12a1Q60847 Gm14497-201ENSMUST00000119537 580 ntBASIC11.75□□□□□ -0.53
Col12a1Q60847 Gm13624-201ENSMUST00000120263 462 ntBASIC11.75□□□□□ -0.53
Col12a1Q60847 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col12a1Q60847 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC11.75□□□□□ -0.53
Col12a1Q60847 Gm7504-201ENSMUST00000201449 424 ntBASIC11.75□□□□□ -0.53
Col12a1Q60847 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.75□□□□□ -0.53
Col12a1Q60847 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col12a1Q60847 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col12a1Q60847 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col12a1Q60847 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.75□□□□□ -0.53
Col12a1Q60847 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Col12a1Q60847 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col12a1Q60847 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col12a1Q60847 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Col12a1Q60847 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col12a1Q60847 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col12a1Q60847 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col12a1Q60847 Gm12470-201ENSMUST00000117239 1049 ntBASIC11.75□□□□□ -0.53
Col12a1Q60847 Gm13094-201ENSMUST00000117930 409 ntBASIC11.75□□□□□ -0.53
Col12a1Q60847 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col12a1Q60847 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC11.75□□□□□ -0.53
Col12a1Q60847 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.75□□□□□ -0.53
Col12a1Q60847 Gm5335-201ENSMUST00000182995 1000 ntBASIC11.75□□□□□ -0.53
Col12a1Q60847 Gm38117-201ENSMUST00000194653 939 ntBASIC11.75□□□□□ -0.53
Col12a1Q60847 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC11.75□□□□□ -0.53
Col12a1Q60847 Gm7940-201ENSMUST00000218195 769 ntBASIC11.75□□□□□ -0.53
Col12a1Q60847 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col12a1Q60847 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col12a1Q60847 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col12a1Q60847 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.75□□□□□ -0.53
Col12a1Q60847 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Col12a1Q60847 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col12a1Q60847 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Col12a1Q60847 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Col12a1Q60847 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Col12a1Q60847 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC11.75□□□□□ -0.53
Col12a1Q60847 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Col12a1Q60847 Mir8093-201ENSMUST00000185043 137 ntBASIC11.75□□□□□ -0.53
Col12a1Q60847 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col12a1Q60847 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.75□□□□□ -0.53
Col12a1Q60847 Gm37851-201ENSMUST00000193871 889 ntBASIC11.75□□□□□ -0.53
Col12a1Q60847 Gm17825-201ENSMUST00000206836 794 ntBASIC11.75□□□□□ -0.53
Col12a1Q60847 Gm44814-201ENSMUST00000207018 434 ntBASIC11.75□□□□□ -0.53
Col12a1Q60847 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col12a1Q60847 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Col12a1Q60847 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col12a1Q60847 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col12a1Q60847 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col12a1Q60847 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col12a1Q60847 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col12a1Q60847 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.74□□□□□ -0.53
Col12a1Q60847 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col12a1Q60847 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col12a1Q60847 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col12a1Q60847 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col12a1Q60847 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.74□□□□□ -0.53
Col12a1Q60847 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col12a1Q60847 Gm23769-201ENSMUST00000104441 121 ntBASIC11.74□□□□□ -0.53
Col12a1Q60847 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col12a1Q60847 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col12a1Q60847 Gm13827-201ENSMUST00000148801 372 ntBASIC11.74□□□□□ -0.53
Col12a1Q60847 Gm25830-201ENSMUST00000158923 132 ntBASIC11.74□□□□□ -0.53
Col12a1Q60847 Gm37207-201ENSMUST00000194284 296 ntBASIC11.74□□□□□ -0.53
Col12a1Q60847 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col12a1Q60847 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col12a1Q60847 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col12a1Q60847 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col12a1Q60847 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col12a1Q60847 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col12a1Q60847 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col12a1Q60847 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col12a1Q60847 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col12a1Q60847 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col12a1Q60847 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col12a1Q60847 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC11.74□□□□□ -0.53
Col12a1Q60847 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Col12a1Q60847 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col12a1Q60847 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col12a1Q60847 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col12a1Q60847 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col12a1Q60847 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col12a1Q60847 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col12a1Q60847 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.74□□□□□ -0.53
Col12a1Q60847 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col12a1Q60847 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col12a1Q60847 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col12a1Q60847 Gm27826-201ENSMUST00000175282 255 ntBASIC11.73□□□□□ -0.53
Col12a1Q60847 Gm6606-201ENSMUST00000193613 947 ntBASIC11.73□□□□□ -0.53
Col12a1Q60847 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC11.73□□□□□ -0.53
Col12a1Q60847 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC11.73□□□□□ -0.53
Col12a1Q60847 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.73□□□□□ -0.53
Col12a1Q60847 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col12a1Q60847 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms