Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm9139-201ENSMUST00000218817 700 ntBASIC13.96□□□□□ -0.17
Ccdc88aQ5SNZ0 AC166341.2-201ENSMUST00000220571 120 ntBASIC13.96□□□□□ -0.17
Ccdc88aQ5SNZ0 Prrxl1-205ENSMUST00000228878 723 ntBASIC13.96□□□□□ -0.17
Ccdc88aQ5SNZ0 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc88aQ5SNZ0 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc88aQ5SNZ0 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc88aQ5SNZ0 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc88aQ5SNZ0 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc88aQ5SNZ0 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc88aQ5SNZ0 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc88aQ5SNZ0 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc88aQ5SNZ0 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc88aQ5SNZ0 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc88aQ5SNZ0 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc88aQ5SNZ0 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc88aQ5SNZ0 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc88aQ5SNZ0 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Ccdc88aQ5SNZ0 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
Ccdc88aQ5SNZ0 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc88aQ5SNZ0 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc88aQ5SNZ0 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc88aQ5SNZ0 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc88aQ5SNZ0 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc88aQ5SNZ0 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc88aQ5SNZ0 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.95□□□□□ -0.18
Ccdc88aQ5SNZ0 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm11451-201ENSMUST00000118946 630 ntBASIC13.95□□□□□ -0.18
Ccdc88aQ5SNZ0 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm23045-201ENSMUST00000175041 96 ntBASIC13.95□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm3332-201ENSMUST00000189337 928 ntBASIC13.95□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.95□□□□□ -0.18
Ccdc88aQ5SNZ0 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc88aQ5SNZ0 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ccdc88aQ5SNZ0 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc88aQ5SNZ0 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc88aQ5SNZ0 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc88aQ5SNZ0 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc88aQ5SNZ0 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc88aQ5SNZ0 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc88aQ5SNZ0 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc88aQ5SNZ0 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc88aQ5SNZ0 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc88aQ5SNZ0 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.95□□□□□ -0.18
Ccdc88aQ5SNZ0 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc88aQ5SNZ0 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.95□□□□□ -0.18
Ccdc88aQ5SNZ0 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc88aQ5SNZ0 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc88aQ5SNZ0 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc88aQ5SNZ0 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc88aQ5SNZ0 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC13.95□□□□□ -0.18
Ccdc88aQ5SNZ0 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm12857-201ENSMUST00000117678 592 ntBASIC13.95□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm23153-201ENSMUST00000175323 313 ntBASIC13.95□□□□□ -0.18
Ccdc88aQ5SNZ0 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc88aQ5SNZ0 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.95□□□□□ -0.18
Ccdc88aQ5SNZ0 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc88aQ5SNZ0 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc88aQ5SNZ0 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.94□□□□□ -0.18
Ccdc88aQ5SNZ0 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Ccdc88aQ5SNZ0 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.94□□□□□ -0.18
Ccdc88aQ5SNZ0 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc88aQ5SNZ0 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Ccdc88aQ5SNZ0 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc88aQ5SNZ0 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.94□□□□□ -0.18
Ccdc88aQ5SNZ0 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.94□□□□□ -0.18
Ccdc88aQ5SNZ0 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc88aQ5SNZ0 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
Ccdc88aQ5SNZ0 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC13.94□□□□□ -0.18
Ccdc88aQ5SNZ0 Cd63-ps-202ENSMUST00000154992 717 ntBASIC13.94□□□□□ -0.18
Ccdc88aQ5SNZ0 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.94□□□□□ -0.18
Ccdc88aQ5SNZ0 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Ccdc88aQ5SNZ0 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC13.94□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm38228-201ENSMUST00000193169 1293 ntBASIC13.94□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm7902-201ENSMUST00000198842 947 ntBASIC13.94□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm43610-201ENSMUST00000199117 365 ntBASIC13.94□□□□□ -0.18
Ccdc88aQ5SNZ0 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.94□□□□□ -0.18
Ccdc88aQ5SNZ0 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC13.94□□□□□ -0.18
Ccdc88aQ5SNZ0 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc88aQ5SNZ0 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc88aQ5SNZ0 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc88aQ5SNZ0 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc88aQ5SNZ0 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Ccdc88aQ5SNZ0 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc88aQ5SNZ0 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc88aQ5SNZ0 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc88aQ5SNZ0 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc88aQ5SNZ0 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc88aQ5SNZ0 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc88aQ5SNZ0 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Ccdc88aQ5SNZ0 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc88aQ5SNZ0 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc88aQ5SNZ0 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc88aQ5SNZ0 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm4726-201ENSMUST00000135604 736 ntBASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm6019-201ENSMUST00000148369 736 ntBASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm5706-201ENSMUST00000181525 993 ntBASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms