Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Gm37424-201ENSMUST00000191727 561 ntBASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Gm38002-201ENSMUST00000193255 180 ntBASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Gm8227-201ENSMUST00000223306 571 ntBASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 AC131068.2-201ENSMUST00000226175 1453 ntBASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Gm2606-201ENSMUST00000100754 1002 ntBASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Gm10434-201ENSMUST00000101158 471 ntBASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Gm12286-201ENSMUST00000119246 1002 ntBASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Gm4986-201ENSMUST00000119731 549 ntBASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Gm8801-201ENSMUST00000173255 1064 ntBASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 AC133598.1-201ENSMUST00000224327 660 ntBASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5d-4Q5R1F6 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Gm12957-201ENSMUST00000117835 377 ntBASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms