Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Gm18782-201ENSMUST00000209023 1399 ntBASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Gm25116-201ENSMUST00000157191 122 ntBASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Gm18734-201ENSMUST00000172937 808 ntBASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Gm9555-201ENSMUST00000200908 583 ntBASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Nsd1-205ENSMUST00000224693 852 ntBASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rc3h1Q4VGL6 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 Gm14247-201ENSMUST00000120950 237 ntBASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 Gm2594-201ENSMUST00000214774 742 ntBASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 Gm5369-201ENSMUST00000217499 588 ntBASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 Gm17872-201ENSMUST00000222550 532 ntBASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 Gm270-201ENSMUST00000223010 976 ntBASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 AC171277.1-201ENSMUST00000216902 1441 ntBASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 Gm13812-201ENSMUST00000118061 1347 ntBASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 Gm13810-201ENSMUST00000118584 1347 ntBASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC14.14□□□□□ -0.15
Rc3h1Q4VGL6 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rc3h1Q4VGL6 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rc3h1Q4VGL6 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rc3h1Q4VGL6 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rc3h1Q4VGL6 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rc3h1Q4VGL6 Gm37391-201ENSMUST00000194891 2318 ntBASIC14.13□□□□□ -0.15
Rc3h1Q4VGL6 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rc3h1Q4VGL6 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rc3h1Q4VGL6 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rc3h1Q4VGL6 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.13□□□□□ -0.15
Rc3h1Q4VGL6 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC14.13□□□□□ -0.15
Rc3h1Q4VGL6 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rc3h1Q4VGL6 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Rc3h1Q4VGL6 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rc3h1Q4VGL6 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC14.13□□□□□ -0.15
Rc3h1Q4VGL6 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC14.13□□□□□ -0.15
Rc3h1Q4VGL6 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rc3h1Q4VGL6 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms