Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Fam196aQ3USH1 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.31□□□□□ -0.44
Fam196aQ3USH1 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Fam196aQ3USH1 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.31□□□□□ -0.44
Fam196aQ3USH1 Gm8956-201ENSMUST00000203939 825 ntBASIC12.31□□□□□ -0.44
Fam196aQ3USH1 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Fam196aQ3USH1 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Fam196aQ3USH1 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Fam196aQ3USH1 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.31□□□□□ -0.44
Fam196aQ3USH1 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Fam196aQ3USH1 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Fam196aQ3USH1 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Fam196aQ3USH1 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Fam196aQ3USH1 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Fam196aQ3USH1 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Fam196aQ3USH1 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.31□□□□□ -0.44
Fam196aQ3USH1 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Fam196aQ3USH1 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Fam196aQ3USH1 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Fam196aQ3USH1 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Fam196aQ3USH1 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Fam196aQ3USH1 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Fam196aQ3USH1 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Fam196aQ3USH1 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Gm16166-201ENSMUST00000118291 787 ntBASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Gm14942-201ENSMUST00000119642 336 ntBASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Gm23119-201ENSMUST00000158610 140 ntBASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Gm18201-201ENSMUST00000174735 875 ntBASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Gm26989-201ENSMUST00000182608 749 ntBASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Mir6407-201ENSMUST00000184510 101 ntBASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Gm44647-201ENSMUST00000207402 428 ntBASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Gm44953-201ENSMUST00000208745 1286 ntBASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.3□□□□□ -0.44
Fam196aQ3USH1 AC154361.2-201ENSMUST00000224747 943 ntBASIC12.3□□□□□ -0.44
Fam196aQ3USH1 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fam196aQ3USH1 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fam196aQ3USH1 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Fam196aQ3USH1 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fam196aQ3USH1 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fam196aQ3USH1 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fam196aQ3USH1 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fam196aQ3USH1 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Fam196aQ3USH1 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms