Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.23□□□□□ -0.61
Nhlrc4Q3UP44 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nhlrc4Q3UP44 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nhlrc4Q3UP44 Gm15276-201ENSMUST00000145953 498 ntBASIC11.23□□□□□ -0.61
Nhlrc4Q3UP44 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nhlrc4Q3UP44 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nhlrc4Q3UP44 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.23□□□□□ -0.61
Nhlrc4Q3UP44 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nhlrc4Q3UP44 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.23□□□□□ -0.61
Nhlrc4Q3UP44 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Nhlrc4Q3UP44 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nhlrc4Q3UP44 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nhlrc4Q3UP44 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nhlrc4Q3UP44 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nhlrc4Q3UP44 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.23□□□□□ -0.61
Nhlrc4Q3UP44 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.23□□□□□ -0.61
Nhlrc4Q3UP44 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nhlrc4Q3UP44 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nhlrc4Q3UP44 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Nhlrc4Q3UP44 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nhlrc4Q3UP44 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nhlrc4Q3UP44 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nhlrc4Q3UP44 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nhlrc4Q3UP44 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Nhlrc4Q3UP44 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nhlrc4Q3UP44 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nhlrc4Q3UP44 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nhlrc4Q3UP44 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Gm25890-201ENSMUST00000177643 165 ntBASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Gm22614-201ENSMUST00000178300 165 ntBASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Rprl1-202ENSMUST00000198476 238 ntBASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Gm22042-201ENSMUST00000082989 165 ntBASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Gm26110-201ENSMUST00000083971 165 ntBASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.22□□□□□ -0.61
Nhlrc4Q3UP44 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nhlrc4Q3UP44 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nhlrc4Q3UP44 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nhlrc4Q3UP44 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nhlrc4Q3UP44 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nhlrc4Q3UP44 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.21□□□□□ -0.61
Nhlrc4Q3UP44 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nhlrc4Q3UP44 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nhlrc4Q3UP44 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Nhlrc4Q3UP44 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.21□□□□□ -0.61
Nhlrc4Q3UP44 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nhlrc4Q3UP44 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.21□□□□□ -0.61
Nhlrc4Q3UP44 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nhlrc4Q3UP44 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Nhlrc4Q3UP44 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nhlrc4Q3UP44 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.21□□□□□ -0.61
Nhlrc4Q3UP44 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nhlrc4Q3UP44 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.21□□□□□ -0.61
Nhlrc4Q3UP44 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.21□□□□□ -0.61
Nhlrc4Q3UP44 Gm25668-201ENSMUST00000157700 129 ntBASIC11.21□□□□□ -0.61
Nhlrc4Q3UP44 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Nhlrc4Q3UP44 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nhlrc4Q3UP44 Gm5706-201ENSMUST00000181525 993 ntBASIC11.21□□□□□ -0.61
Nhlrc4Q3UP44 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.21□□□□□ -0.61
Nhlrc4Q3UP44 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms